RNA–Protein interactions for RNA: ENST00000319977.8

C17orf53-202, Transcript of chromosome 17 open reading frame 53, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C17orf53, Length 2,725 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C17orf53-202ENST00000319977 NISCHQ9Y2I1 1504 aa22.36■■□□□ 1.17
C17orf53-202ENST00000319977 PELP1Q8IZL8 1130 aaKnown RBP20.87■□□□□ 0.93
C17orf53-202ENST00000319977 HRCP23327 699 aa20.83■□□□□ 0.92
C17orf53-202ENST00000319977 MYT1Q01538 1121 aa20.25■□□□□ 0.83
C17orf53-202ENST00000319977 PPARGC1BQ86YN6 1023 aaKnown RBP20.24■□□□□ 0.83
C17orf53-202ENST00000319977 PCGF6Q9BYE7 350 aa20.1■□□□□ 0.81
C17orf53-202ENST00000319977 SCAF1Q9H7N4 1312 aaKnown RBP19.9■□□□□ 0.78
C17orf53-202ENST00000319977 SHROOM4Q9ULL8 1493 aa19.85■□□□□ 0.77
C17orf53-202ENST00000319977 MYO15BQ96JP2 1530 aa19.72■□□□□ 0.75
C17orf53-202ENST00000319977 SUPT5HO00267 1087 aaKnown RBP19.71■□□□□ 0.75
C17orf53-202ENST00000319977 DCAF1Q9Y4B6 1507 aa19.55■□□□□ 0.72
C17orf53-202ENST00000319977 CHIC1Q5VXU3 224 aa19.54■□□□□ 0.72
C17orf53-202ENST00000319977 ZEB1P37275 1124 aaPredicted RBP19.48■□□□□ 0.71
C17orf53-202ENST00000319977 TRIM26Q12899 539 aaPredicted RBP19.42■□□□□ 0.7
C17orf53-202ENST00000319977 CCDC180Q9P1Z9 1646 aa19.36■□□□□ 0.69
C17orf53-202ENST00000319977 ACIN1Q9UKV3 1341 aaKnown RBP19.32■□□□□ 0.68
C17orf53-202ENST00000319977 NEUROD1Q13562 356 aa19.19■□□□□ 0.66
C17orf53-202ENST00000319977 TTBK1Q5TCY1 1321 aaPredicted RBP19.15■□□□□ 0.66
C17orf53-202ENST00000319977 GTF3C3Q9Y5Q9 886 aa19.15■□□□□ 0.66
C17orf53-202ENST00000319977 LOC105371045A0A1W2PR82 267 aa19.07■□□□□ 0.64
C17orf53-202ENST00000319977 CENPBP07199 599 aaPredicted RBP19.04■□□□□ 0.64
C17orf53-202ENST00000319977 ZCCHC6Q5VYS8 1495 aaKnown RBP18.99■□□□□ 0.63
C17orf53-202ENST00000319977 DCAF8L2P0C7V8 631 aa18.83■□□□□ 0.6
C17orf53-202ENST00000319977 DIEXFQ68CQ4 756 aaKnown RBP18.73■□□□□ 0.59
C17orf53-202ENST00000319977 BCL11AQ9H165 835 aa18.72■□□□□ 0.59
C17orf53-202ENST00000319977 FAM9AQ8IZU1 332 aaPredicted RBP18.54■□□□□ 0.56
C17orf53-202ENST00000319977 CCER1Q8TC90 406 aaPredicted RBP18.48■□□□□ 0.55
C17orf53-202ENST00000319977 ANP32EQ9BTT0 268 aa18.48■□□□□ 0.55
C17orf53-202ENST00000319977 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.45■□□□□ 0.54
C17orf53-202ENST00000319977 TRIM41Q8WV44 630 aa18.43■□□□□ 0.54
C17orf53-202ENST00000319977 YTHDC1Q96MU7 727 aaKnown RBP18.38■□□□□ 0.53
C17orf53-202ENST00000319977 ZNF316A6NFI3 1004 aaPredicted RBP18.29■□□□□ 0.52
C17orf53-202ENST00000319977 PRKCSHP14314 528 aaPredicted RBP18.28■□□□□ 0.52
C17orf53-202ENST00000319977 CSRNP3Q8WYN3 585 aa18.24■□□□□ 0.51
C17orf53-202ENST00000319977 EHMT2Q96KQ7 1210 aa18.24■□□□□ 0.51
C17orf53-202ENST00000319977 CLSPNQ9HAW4 1339 aa18.23■□□□□ 0.51
C17orf53-202ENST00000319977 TSHZ2Q9NRE2 1034 aa18.19■□□□□ 0.5
C17orf53-202ENST00000319977 MIER1Q8N108 512 aa18.18■□□□□ 0.5
C17orf53-202ENST00000319977 SUPT16HQ9Y5B9 1047 aaKnown RBP18.14■□□□□ 0.49
C17orf53-202ENST00000319977 ABCC9O60706 1549 aa18.02■□□□□ 0.47
C17orf53-202ENST00000319977 ERICH6Q7L0X2 663 aa18.01■□□□□ 0.47
C17orf53-202ENST00000319977 RSF1Q96T23 1441 aaPredicted RBP17.99■□□□□ 0.47
C17orf53-202ENST00000319977 RB1CC1Q8TDY2 1594 aa17.92■□□□□ 0.46
C17orf53-202ENST00000319977 SCRIBQ14160 1630 aa17.81■□□□□ 0.44
C17orf53-202ENST00000319977 APLP2Q06481 763 aa17.75■□□□□ 0.43
C17orf53-202ENST00000319977 WRNQ14191 1432 aaPredicted RBP eCLIP17.73■□□□□ 0.43
C17orf53-202ENST00000319977 RBM19Q9Y4C8 960 aaKnown RBP17.72■□□□□ 0.43
C17orf53-202ENST00000319977 BCANQ96GW7 911 aa17.59■□□□□ 0.41
C17orf53-202ENST00000319977 MSH5O43196 834 aa17.58■□□□□ 0.4
C17orf53-202ENST00000319977 CECR2Q9BXF3 1484 aa17.58■□□□□ 0.4
C17orf53-202ENST00000319977 MYT1LQ9UL68 1186 aa17.57■□□□□ 0.4
C17orf53-202ENST00000319977 FKBP8Q14318 412 aa17.54■□□□□ 0.4
C17orf53-202ENST00000319977 MROH2BQ7Z745 1585 aa17.51■□□□□ 0.39
C17orf53-202ENST00000319977 FANCIQ9NVI1 1328 aa17.48■□□□□ 0.39
C17orf53-202ENST00000319977 ANO8Q9HCE9 1232 aaPredicted RBP17.48■□□□□ 0.39
C17orf53-202ENST00000319977 CEP162Q5TB80 1403 aa17.47■□□□□ 0.39
C17orf53-202ENST00000319977 WIZO95785 1651 aa17.46■□□□□ 0.38
C17orf53-202ENST00000319977 HNRNPUL2Q1KMD3 747 aaKnown RBP17.44■□□□□ 0.38
C17orf53-202ENST00000319977 DEKP35659 375 aaKnown RBP17.43■□□□□ 0.38
C17orf53-202ENST00000319977 NEFLP07196 543 aa17.41■□□□□ 0.38
C17orf53-202ENST00000319977 TNIKQ9UKE5 1360 aa17.35■□□□□ 0.37
C17orf53-202ENST00000319977 ITGAEP38570 1179 aa17.34■□□□□ 0.37
C17orf53-202ENST00000319977 ERICH6BQ5W0A0 696 aa17.34■□□□□ 0.37
C17orf53-202ENST00000319977 CCDC88BA6NC98 1476 aa17.34■□□□□ 0.37
C17orf53-202ENST00000319977 ABCC8Q09428 1581 aa17.33■□□□□ 0.37
C17orf53-202ENST00000319977 KCNH8Q96L42 1107 aa17.33■□□□□ 0.36
C17orf53-202ENST00000319977 EIF4G1Q04637 1599 aaKnown RBP17.31■□□□□ 0.36
C17orf53-202ENST00000319977 UBTFP17480 764 aaKnown RBP17.29■□□□□ 0.36
C17orf53-202ENST00000319977 SOGA1O94964 1423 aa17.29■□□□□ 0.36
C17orf53-202ENST00000319977 SALL2Q9Y467 1007 aaPredicted RBP17.27■□□□□ 0.35
C17orf53-202ENST00000319977 BAZ1AQ9NRL2 1556 aaPredicted RBP17.25■□□□□ 0.35
C17orf53-202ENST00000319977 CDK11AQ9UQ88 783 aaPredicted RBP17.24■□□□□ 0.35
C17orf53-202ENST00000319977 UBE2Q2Q8WVN8 375 aa17.22■□□□□ 0.35
C17orf53-202ENST00000319977 RUSC2Q8N2Y8 1516 aa17.2■□□□□ 0.34
C17orf53-202ENST00000319977 DHX57Q6P158 1386 aaKnown RBP17.19■□□□□ 0.34
C17orf53-202ENST00000319977 NACADO15069 1562 aa17.12■□□□□ 0.33
C17orf53-202ENST00000319977 CCDC136Q96JN2 1154 aa17.12■□□□□ 0.33
C17orf53-202ENST00000319977 EEA1Q15075 1411 aa17.07■□□□□ 0.32
C17orf53-202ENST00000319977 TRIM52Q96A61 297 aa17.07■□□□□ 0.32
C17orf53-202ENST00000319977 GOLGA3Q08378 1498 aa17.06■□□□□ 0.32
C17orf53-202ENST00000319977 NBR1Q14596 966 aa17.05■□□□□ 0.32
C17orf53-202ENST00000319977 TOP2AP11388 1531 aaKnown RBP17.05■□□□□ 0.32
C17orf53-202ENST00000319977 NOP58Q9Y2X3 529 aaKnown RBP17.05■□□□□ 0.32
C17orf53-202ENST00000319977 CCER2I3L3R5 266 aa17.04■□□□□ 0.32
C17orf53-202ENST00000319977 SMARCA2P51531 1590 aa17.03■□□□□ 0.32
C17orf53-202ENST00000319977 RANGAP1P46060 587 aaPredicted RBP17.02■□□□□ 0.31
C17orf53-202ENST00000319977 DDX10Q13206 875 aaKnown RBP17■□□□□ 0.31
C17orf53-202ENST00000319977 IL27Q8NEV9 243 aa16.99■□□□□ 0.31
C17orf53-202ENST00000319977 VPS8Q8N3P4 1428 aa16.96■□□□□ 0.31
C17orf53-202ENST00000319977 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.96■□□□□ 0.31
C17orf53-202ENST00000319977 CLIP1P30622 1438 aa16.95■□□□□ 0.3
C17orf53-202ENST00000319977 RTL5Q5HYW3 569 aaPredicted RBP16.95■□□□□ 0.3
C17orf53-202ENST00000319977 PPP1R15AO75807 674 aaPredicted RBP16.94■□□□□ 0.3
C17orf53-202ENST00000319977 PAK3O75914 559 aaPredicted RBP16.94■□□□□ 0.3
C17orf53-202ENST00000319977 RTN4Q9NQC3 1192 aaKnown RBP16.92■□□□□ 0.3
C17orf53-202ENST00000319977 PPP4R2Q9NY27 417 aa16.92■□□□□ 0.3
C17orf53-202ENST00000319977 ANP32CO43423 234 aa16.91■□□□□ 0.3
C17orf53-202ENST00000319977 SMARCA4P51532 1647 aa16.91■□□□□ 0.3
C17orf53-202ENST00000319977 IRX6P78412 446 aaPredicted RBP16.91■□□□□ 0.3
C17orf53-202ENST00000319977 CEP164Q9UPV0 1460 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms