Protein–RNA interactions for Protein: P27695

APEX1, DNA-(apurinic or apyrimidinic site) lyase, humanhuman

Known RBP Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1P27695 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.5□□□□□ -0.25
APEX1P27695 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.5□□□□□ -0.25
APEX1P27695 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APEX1P27695 AC018442.1-201ENST00000421439 2061 ntBASIC13.5□□□□□ -0.25
APEX1P27695 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
APEX1P27695 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
APEX1P27695 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APEX1P27695 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
APEX1P27695 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APEX1P27695 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
APEX1P27695 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC13.5□□□□□ -0.25
APEX1P27695 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
APEX1P27695 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.5□□□□□ -0.25
APEX1P27695 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.5□□□□□ -0.25
APEX1P27695 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
APEX1P27695 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
APEX1P27695 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.5□□□□□ -0.25
APEX1P27695 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
APEX1P27695 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.49□□□□□ -0.25
APEX1P27695 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APEX1P27695 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APEX1P27695 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APEX1P27695 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APEX1P27695 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
APEX1P27695 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APEX1P27695 CU639417.3-201ENST00000624240 1404 ntBASIC13.49□□□□□ -0.25
APEX1P27695 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APEX1P27695 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APEX1P27695 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APEX1P27695 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
APEX1P27695 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.49□□□□□ -0.25
APEX1P27695 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.49□□□□□ -0.25
APEX1P27695 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APEX1P27695 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APEX1P27695 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
APEX1P27695 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APEX1P27695 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APEX1P27695 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APEX1P27695 AC087499.6-201ENST00000411576 835 ntBASIC13.49□□□□□ -0.25
APEX1P27695 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.49□□□□□ -0.25
APEX1P27695 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
APEX1P27695 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.49□□□□□ -0.25
APEX1P27695 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.49□□□□□ -0.25
APEX1P27695 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.49□□□□□ -0.25
APEX1P27695 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.49□□□□□ -0.25
APEX1P27695 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.49□□□□□ -0.25
APEX1P27695 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.49□□□□□ -0.25
APEX1P27695 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
APEX1P27695 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.49□□□□□ -0.25
APEX1P27695 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APEX1P27695 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.49□□□□□ -0.25
APEX1P27695 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.49□□□□□ -0.25
APEX1P27695 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
APEX1P27695 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
APEX1P27695 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.49□□□□□ -0.25
APEX1P27695 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
APEX1P27695 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APEX1P27695 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APEX1P27695 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
APEX1P27695 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.49□□□□□ -0.25
APEX1P27695 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APEX1P27695 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
APEX1P27695 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
APEX1P27695 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APEX1P27695 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.49□□□□□ -0.25
APEX1P27695 AC130686.1-201ENST00000622936 2466 ntBASIC13.49□□□□□ -0.25
APEX1P27695 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.49□□□□□ -0.25
APEX1P27695 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APEX1P27695 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APEX1P27695 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APEX1P27695 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.48□□□□□ -0.25
APEX1P27695 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
APEX1P27695 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.48□□□□□ -0.25
APEX1P27695 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.48□□□□□ -0.25
APEX1P27695 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
APEX1P27695 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.48□□□□□ -0.25
APEX1P27695 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
APEX1P27695 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.48□□□□□ -0.25
APEX1P27695 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
APEX1P27695 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
APEX1P27695 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
APEX1P27695 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.48□□□□□ -0.25
APEX1P27695 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.48□□□□□ -0.25
APEX1P27695 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC13.48□□□□□ -0.25
APEX1P27695 AC104596.2-201ENST00000512793 793 ntBASIC13.48□□□□□ -0.25
APEX1P27695 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.48□□□□□ -0.25
APEX1P27695 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.48□□□□□ -0.25
APEX1P27695 AC123567.1-201ENST00000548294 1261 ntBASIC13.48□□□□□ -0.25
APEX1P27695 RRP7BP-205ENST00000566851 833 ntBASIC13.48□□□□□ -0.25
APEX1P27695 MIR8072-201ENST00000614241 80 ntBASIC13.48□□□□□ -0.25
APEX1P27695 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.48□□□□□ -0.25
APEX1P27695 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.48□□□□□ -0.25
APEX1P27695 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.48□□□□□ -0.25
APEX1P27695 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.48□□□□□ -0.25
APEX1P27695 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
APEX1P27695 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.48□□□□□ -0.25
APEX1P27695 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
APEX1P27695 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
APEX1P27695 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
APEX1P27695 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms