Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.81■□□□□ 0.44
CHMLP26374 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMLP26374 WNT11-204ENST00000621122 789 ntTSL 5 BASIC17.81■□□□□ 0.44
CHMLP26374 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC17.81■□□□□ 0.44
CHMLP26374 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMLP26374 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMLP26374 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHMLP26374 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMLP26374 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHMLP26374 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
CHMLP26374 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHMLP26374 HSPA8P5-201ENST00000456928 2069 ntBASIC17.81■□□□□ 0.44
CHMLP26374 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMLP26374 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CHMLP26374 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHMLP26374 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHMLP26374 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHMLP26374 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHMLP26374 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC17.8■□□□□ 0.44
CHMLP26374 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHMLP26374 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC17.8■□□□□ 0.44
CHMLP26374 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC17.8■□□□□ 0.44
CHMLP26374 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHMLP26374 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CHMLP26374 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHMLP26374 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC17.8■□□□□ 0.44
CHMLP26374 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHMLP26374 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHMLP26374 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CHMLP26374 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CHMLP26374 AL136309.1-201ENST00000403917 691 ntBASIC17.8■□□□□ 0.44
CHMLP26374 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CHMLP26374 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC17.8■□□□□ 0.44
CHMLP26374 CHMP1AP1-201ENST00000445563 662 ntBASIC17.8■□□□□ 0.44
CHMLP26374 CICP12-201ENST00000455801 843 ntBASIC17.8■□□□□ 0.44
CHMLP26374 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHMLP26374 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17.8■□□□□ 0.44
CHMLP26374 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.8■□□□□ 0.44
CHMLP26374 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.8■□□□□ 0.44
CHMLP26374 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHMLP26374 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHMLP26374 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.8■□□□□ 0.44
CHMLP26374 ORC6-206ENST00000568364 888 ntTSL 5 BASIC17.8■□□□□ 0.44
CHMLP26374 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.8■□□□□ 0.44
CHMLP26374 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.8■□□□□ 0.44
CHMLP26374 PDIA3P1-201ENST00000471856 1510 ntBASIC17.8■□□□□ 0.44
CHMLP26374 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHMLP26374 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC17.8■□□□□ 0.44
CHMLP26374 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHMLP26374 HPD-204ENST00000543163 1709 ntTSL 5 BASIC17.8■□□□□ 0.44
CHMLP26374 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHMLP26374 KRT8P4-201ENST00000509735 1454 ntBASIC17.8■□□□□ 0.44
CHMLP26374 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.8■□□□□ 0.44
CHMLP26374 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CHMLP26374 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC17.8■□□□□ 0.44
CHMLP26374 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHMLP26374 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHMLP26374 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CHMLP26374 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CHMLP26374 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CHMLP26374 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHMLP26374 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CHMLP26374 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CHMLP26374 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CHMLP26374 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
CHMLP26374 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHMLP26374 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMLP26374 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CHMLP26374 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC17.79■□□□□ 0.44
CHMLP26374 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMLP26374 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CHMLP26374 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CHMLP26374 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHMLP26374 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
CHMLP26374 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMLP26374 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMLP26374 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMLP26374 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMLP26374 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.79■□□□□ 0.44
CHMLP26374 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17.79■□□□□ 0.44
CHMLP26374 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.79■□□□□ 0.44
CHMLP26374 KRT43P-201ENST00000434019 910 ntBASIC17.79■□□□□ 0.44
CHMLP26374 KRT17P7-201ENST00000451704 1104 ntBASIC17.79■□□□□ 0.44
CHMLP26374 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHMLP26374 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.79■□□□□ 0.44
CHMLP26374 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC17.79■□□□□ 0.44
CHMLP26374 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.79■□□□□ 0.44
CHMLP26374 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC17.79■□□□□ 0.44
CHMLP26374 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.79■□□□□ 0.44
CHMLP26374 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMLP26374 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC17.79■□□□□ 0.44
CHMLP26374 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC17.79■□□□□ 0.44
CHMLP26374 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC17.79■□□□□ 0.44
CHMLP26374 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMLP26374 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
CHMLP26374 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMLP26374 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CHMLP26374 C1R-201ENST00000535233 2211 ntTSL 2 BASIC17.79■□□□□ 0.44
CHMLP26374 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMLP26374 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms