Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
ALDH1A1P00352 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
ALDH1A1P00352 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.59■□□□□ 0.25
ALDH1A1P00352 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ALDH1A1P00352 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16.59■□□□□ 0.25
ALDH1A1P00352 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ALDH1A1P00352 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.59■□□□□ 0.25
ALDH1A1P00352 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC16.59■□□□□ 0.25
ALDH1A1P00352 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.59■□□□□ 0.25
ALDH1A1P00352 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.59■□□□□ 0.25
ALDH1A1P00352 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ALDH1A1P00352 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
ALDH1A1P00352 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ALDH1A1P00352 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ALDH1A1P00352 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ALDH1A1P00352 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ALDH1A1P00352 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
ALDH1A1P00352 ASS1P2-201ENST00000439895 1223 ntBASIC16.59■□□□□ 0.25
ALDH1A1P00352 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC16.59■□□□□ 0.25
ALDH1A1P00352 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC16.59■□□□□ 0.25
ALDH1A1P00352 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC16.59■□□□□ 0.25
ALDH1A1P00352 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC16.59■□□□□ 0.25
ALDH1A1P00352 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC16.59■□□□□ 0.25
ALDH1A1P00352 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC16.59■□□□□ 0.25
ALDH1A1P00352 NDUFB10P1-201ENST00000567319 521 ntBASIC16.59■□□□□ 0.25
ALDH1A1P00352 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC16.59■□□□□ 0.25
ALDH1A1P00352 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC16.59■□□□□ 0.25
ALDH1A1P00352 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC16.59■□□□□ 0.25
ALDH1A1P00352 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC16.59■□□□□ 0.25
ALDH1A1P00352 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC16.59■□□□□ 0.25
ALDH1A1P00352 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC16.59■□□□□ 0.25
ALDH1A1P00352 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ALDH1A1P00352 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC16.59■□□□□ 0.25
ALDH1A1P00352 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
ALDH1A1P00352 PCDHB19P-201ENST00000570871 2371 ntBASIC16.59■□□□□ 0.25
ALDH1A1P00352 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ALDH1A1P00352 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.59■□□□□ 0.25
ALDH1A1P00352 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ALDH1A1P00352 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
ALDH1A1P00352 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ALDH1A1P00352 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ALDH1A1P00352 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ALDH1A1P00352 AC139712.1-201ENST00000378256 1875 ntBASIC16.59■□□□□ 0.25
ALDH1A1P00352 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
ALDH1A1P00352 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
ALDH1A1P00352 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ALDH1A1P00352 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
ALDH1A1P00352 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
ALDH1A1P00352 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ALDH1A1P00352 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
ALDH1A1P00352 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.58■□□□□ 0.25
ALDH1A1P00352 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
ALDH1A1P00352 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
ALDH1A1P00352 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ALDH1A1P00352 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ALDH1A1P00352 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ALDH1A1P00352 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ALDH1A1P00352 BAX-205ENST00000391871 687 ntTSL 5 BASIC16.58■□□□□ 0.24
ALDH1A1P00352 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ALDH1A1P00352 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC16.58■□□□□ 0.24
ALDH1A1P00352 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ALDH1A1P00352 AC006529.1-201ENST00000459978 637 ntBASIC16.58■□□□□ 0.24
ALDH1A1P00352 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
ALDH1A1P00352 PFN2-212ENST00000490975 858 ntTSL 4 BASIC16.58■□□□□ 0.24
ALDH1A1P00352 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC16.58■□□□□ 0.24
ALDH1A1P00352 IGHV1-12-201ENST00000518307 205 ntBASIC16.58■□□□□ 0.24
ALDH1A1P00352 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC16.58■□□□□ 0.24
ALDH1A1P00352 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC16.58■□□□□ 0.24
ALDH1A1P00352 AC092862.1-201ENST00000541534 533 ntBASIC16.58■□□□□ 0.24
ALDH1A1P00352 KRT8P2-201ENST00000556193 944 ntBASIC16.58■□□□□ 0.24
ALDH1A1P00352 AC145285.5-201ENST00000562217 361 ntBASIC16.58■□□□□ 0.24
ALDH1A1P00352 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC16.58■□□□□ 0.24
ALDH1A1P00352 COX5A-205ENST00000568517 582 ntTSL 3 BASIC16.58■□□□□ 0.24
ALDH1A1P00352 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC16.58■□□□□ 0.24
ALDH1A1P00352 AP005264.5-201ENST00000590066 467 ntBASIC16.58■□□□□ 0.24
ALDH1A1P00352 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ALDH1A1P00352 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC16.58■□□□□ 0.24
ALDH1A1P00352 Z99916.3-201ENST00000623422 1080 ntBASIC16.58■□□□□ 0.24
ALDH1A1P00352 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC16.58■□□□□ 0.24
ALDH1A1P00352 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
ALDH1A1P00352 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ALDH1A1P00352 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ALDH1A1P00352 AL591122.2-201ENST00000624125 1853 ntBASIC16.58■□□□□ 0.24
ALDH1A1P00352 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ALDH1A1P00352 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ALDH1A1P00352 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
ALDH1A1P00352 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.58■□□□□ 0.24
ALDH1A1P00352 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ALDH1A1P00352 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ALDH1A1P00352 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ALDH1A1P00352 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
ALDH1A1P00352 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
ALDH1A1P00352 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.57■□□□□ 0.24
ALDH1A1P00352 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ALDH1A1P00352 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.57■□□□□ 0.24
ALDH1A1P00352 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ALDH1A1P00352 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.57■□□□□ 0.24
ALDH1A1P00352 AC090616.6-203ENST00000579186 1945 ntBASIC16.57■□□□□ 0.24
ALDH1A1P00352 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.57■□□□□ 0.24
ALDH1A1P00352 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms