Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 PDIA3P1-201ENST00000471856 1510 ntBASIC10.43□□□□□ -0.74
LINC01546A6NGU7 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 AL022313.4-201ENST00000562756 2046 ntBASIC10.43□□□□□ -0.74
LINC01546A6NGU7 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 NEK7-201ENST00000367383 586 ntTSL 2 BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 NUS1P3-201ENST00000423502 862 ntBASIC10.43□□□□□ -0.74
LINC01546A6NGU7 HCG4P8-203ENST00000443049 980 ntBASIC10.43□□□□□ -0.74
LINC01546A6NGU7 AC069335.1-201ENST00000489972 472 ntBASIC10.43□□□□□ -0.74
LINC01546A6NGU7 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 ALG1L8P-201ENST00000533887 760 ntBASIC10.43□□□□□ -0.74
LINC01546A6NGU7 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 VPS18-202ENST00000558474 873 ntTSL 3 BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 LITAF-211ENST00000572255 516 ntTSL 4 BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 GOLGA8EP-201ENST00000530246 1959 ntBASIC10.43□□□□□ -0.74
LINC01546A6NGU7 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01546A6NGU7 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 GATB-205ENST00000508611 605 ntTSL 2 BASIC10.42□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms