Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC21.52■■□□□ 1.03
HFM1A2PYH4 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
HFM1A2PYH4 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC21.52■■□□□ 1.03
HFM1A2PYH4 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HFM1A2PYH4 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HFM1A2PYH4 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HFM1A2PYH4 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC21.51■■□□□ 1.03
HFM1A2PYH4 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
HFM1A2PYH4 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HFM1A2PYH4 MBP-201ENST00000354542 575 ntTSL 2 BASIC21.51■■□□□ 1.03
HFM1A2PYH4 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HFM1A2PYH4 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HFM1A2PYH4 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
HFM1A2PYH4 AC234782.1-201ENST00000451950 919 ntBASIC21.51■■□□□ 1.03
HFM1A2PYH4 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC21.51■■□□□ 1.03
HFM1A2PYH4 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HFM1A2PYH4 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HFM1A2PYH4 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC21.51■■□□□ 1.03
HFM1A2PYH4 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HFM1A2PYH4 MIR4706-201ENST00000582134 82 ntBASIC21.51■■□□□ 1.03
HFM1A2PYH4 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC21.51■■□□□ 1.03
HFM1A2PYH4 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC21.51■■□□□ 1.03
HFM1A2PYH4 SNX1-214ENST00000625244 324 ntTSL 5 BASIC21.51■■□□□ 1.03
HFM1A2PYH4 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HFM1A2PYH4 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC21.51■■□□□ 1.03
HFM1A2PYH4 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
HFM1A2PYH4 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
HFM1A2PYH4 CCT8L1P-201ENST00000465400 1674 ntBASIC21.51■■□□□ 1.03
HFM1A2PYH4 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HFM1A2PYH4 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC21.51■■□□□ 1.03
HFM1A2PYH4 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC21.51■■□□□ 1.03
HFM1A2PYH4 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC21.5■■□□□ 1.03
HFM1A2PYH4 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
HFM1A2PYH4 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HFM1A2PYH4 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
HFM1A2PYH4 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
HFM1A2PYH4 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HFM1A2PYH4 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HFM1A2PYH4 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
HFM1A2PYH4 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
HFM1A2PYH4 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HFM1A2PYH4 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HFM1A2PYH4 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC21.5■■□□□ 1.03
HFM1A2PYH4 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HFM1A2PYH4 PTPA-217ENST00000434095 870 ntTSL 2 BASIC21.5■■□□□ 1.03
HFM1A2PYH4 RN7SL67P-201ENST00000492147 296 ntBASIC21.5■■□□□ 1.03
HFM1A2PYH4 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HFM1A2PYH4 AC026803.1-201ENST00000569130 274 ntBASIC21.5■■□□□ 1.03
HFM1A2PYH4 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC21.5■■□□□ 1.03
HFM1A2PYH4 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC21.5■■□□□ 1.03
HFM1A2PYH4 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HFM1A2PYH4 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC21.5■■□□□ 1.03
HFM1A2PYH4 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HFM1A2PYH4 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC21.5■■□□□ 1.03
HFM1A2PYH4 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
HFM1A2PYH4 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC21.5■■□□□ 1.03
HFM1A2PYH4 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HFM1A2PYH4 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
HFM1A2PYH4 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HFM1A2PYH4 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
HFM1A2PYH4 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HFM1A2PYH4 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC21.49■■□□□ 1.03
HFM1A2PYH4 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HFM1A2PYH4 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HFM1A2PYH4 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
HFM1A2PYH4 POU5F1P2-201ENST00000521750 823 ntBASIC21.49■■□□□ 1.03
HFM1A2PYH4 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC21.49■■□□□ 1.03
HFM1A2PYH4 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC21.49■■□□□ 1.03
HFM1A2PYH4 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC21.49■■□□□ 1.03
HFM1A2PYH4 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC21.49■■□□□ 1.03
HFM1A2PYH4 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC21.49■■□□□ 1.03
HFM1A2PYH4 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC21.49■■□□□ 1.03
HFM1A2PYH4 AC128714.1-201ENST00000637035 887 ntBASIC21.49■■□□□ 1.03
HFM1A2PYH4 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC21.49■■□□□ 1.03
HFM1A2PYH4 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
HFM1A2PYH4 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HFM1A2PYH4 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HFM1A2PYH4 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HFM1A2PYH4 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
HFM1A2PYH4 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC21.49■■□□□ 1.03
HFM1A2PYH4 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HFM1A2PYH4 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC21.49■■□□□ 1.03
HFM1A2PYH4 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HFM1A2PYH4 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HFM1A2PYH4 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC21.48■■□□□ 1.03
HFM1A2PYH4 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC21.48■■□□□ 1.03
HFM1A2PYH4 BRD7P5-201ENST00000299197 1822 ntBASIC21.48■■□□□ 1.03
HFM1A2PYH4 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HFM1A2PYH4 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
HFM1A2PYH4 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HFM1A2PYH4 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
HFM1A2PYH4 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.03
HFM1A2PYH4 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HFM1A2PYH4 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC21.48■■□□□ 1.03
HFM1A2PYH4 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HFM1A2PYH4 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC21.48■■□□□ 1.03
HFM1A2PYH4 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC21.48■■□□□ 1.03
HFM1A2PYH4 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC21.48■■□□□ 1.03
HFM1A2PYH4 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC21.48■■□□□ 1.03
HFM1A2PYH4 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms