Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 AC098614.1-201ENST00000368528 745 ntBASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 APOA1-205ENST00000375329 927 ntTSL 2 BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 PGGT1BP2-201ENST00000398621 1028 ntBASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 KLF2P2-201ENST00000416807 1039 ntBASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 AC022616.1-201ENST00000518688 554 ntBASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 AC138761.1-201ENST00000584393 385 ntBASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 TET3-201ENST00000305799 5174 ntTSL 5 BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 SLC6A6P1-201ENST00000413933 1850 ntBASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 AL137783.1-201ENST00000623494 1896 ntBASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 LRRC59-203ENST00000576448 1531 ntBASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms