Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
DDX49Q9Y6V7 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC17.93■□□□□ 0.46
DDX49Q9Y6V7 PDIA3P1-201ENST00000471856 1510 ntBASIC17.93■□□□□ 0.46
DDX49Q9Y6V7 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.93■□□□□ 0.46
DDX49Q9Y6V7 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DDX49Q9Y6V7 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DDX49Q9Y6V7 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
DDX49Q9Y6V7 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
DDX49Q9Y6V7 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.93■□□□□ 0.46
DDX49Q9Y6V7 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.93■□□□□ 0.46
DDX49Q9Y6V7 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC17.93■□□□□ 0.46
DDX49Q9Y6V7 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
DDX49Q9Y6V7 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.93■□□□□ 0.46
DDX49Q9Y6V7 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
DDX49Q9Y6V7 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
DDX49Q9Y6V7 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.93■□□□□ 0.46
DDX49Q9Y6V7 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.93■□□□□ 0.46
DDX49Q9Y6V7 BCRP2-202ENST00000447763 634 ntBASIC17.93■□□□□ 0.46
DDX49Q9Y6V7 AC022494.1-201ENST00000466044 728 ntBASIC17.93■□□□□ 0.46
DDX49Q9Y6V7 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.93■□□□□ 0.46
DDX49Q9Y6V7 BCRP6-201ENST00000510112 632 ntBASIC17.93■□□□□ 0.46
DDX49Q9Y6V7 BCRP7-201ENST00000511549 544 ntBASIC17.93■□□□□ 0.46
DDX49Q9Y6V7 MFF-223ENST00000524634 647 ntTSL 2 BASIC17.93■□□□□ 0.46
DDX49Q9Y6V7 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.93■□□□□ 0.46
DDX49Q9Y6V7 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
DDX49Q9Y6V7 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
DDX49Q9Y6V7 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
DDX49Q9Y6V7 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DDX49Q9Y6V7 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
DDX49Q9Y6V7 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
DDX49Q9Y6V7 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC17.93■□□□□ 0.46
DDX49Q9Y6V7 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DDX49Q9Y6V7 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.93■□□□□ 0.46
DDX49Q9Y6V7 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC17.93■□□□□ 0.46
DDX49Q9Y6V7 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DDX49Q9Y6V7 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
DDX49Q9Y6V7 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
DDX49Q9Y6V7 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DDX49Q9Y6V7 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
DDX49Q9Y6V7 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DDX49Q9Y6V7 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
DDX49Q9Y6V7 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
DDX49Q9Y6V7 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
DDX49Q9Y6V7 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC17.93■□□□□ 0.46
DDX49Q9Y6V7 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
DDX49Q9Y6V7 CICP17-201ENST00000418553 2377 ntBASIC17.93■□□□□ 0.46
DDX49Q9Y6V7 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
DDX49Q9Y6V7 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DDX49Q9Y6V7 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
DDX49Q9Y6V7 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.92■□□□□ 0.46
DDX49Q9Y6V7 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
DDX49Q9Y6V7 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
DDX49Q9Y6V7 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC17.92■□□□□ 0.46
DDX49Q9Y6V7 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
DDX49Q9Y6V7 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC17.92■□□□□ 0.46
DDX49Q9Y6V7 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC17.92■□□□□ 0.46
DDX49Q9Y6V7 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DDX49Q9Y6V7 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
DDX49Q9Y6V7 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
DDX49Q9Y6V7 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DDX49Q9Y6V7 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
DDX49Q9Y6V7 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DDX49Q9Y6V7 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DDX49Q9Y6V7 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC17.92■□□□□ 0.46
DDX49Q9Y6V7 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.92■□□□□ 0.46
DDX49Q9Y6V7 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
DDX49Q9Y6V7 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.92■□□□□ 0.46
DDX49Q9Y6V7 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
DDX49Q9Y6V7 KRT223P-202ENST00000449164 1292 ntBASIC17.92■□□□□ 0.46
DDX49Q9Y6V7 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC17.92■□□□□ 0.46
DDX49Q9Y6V7 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC17.92■□□□□ 0.46
DDX49Q9Y6V7 TDH-203ENST00000531764 1110 ntBASIC17.92■□□□□ 0.46
DDX49Q9Y6V7 AC124283.3-201ENST00000570869 594 ntBASIC17.92■□□□□ 0.46
DDX49Q9Y6V7 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17.92■□□□□ 0.46
DDX49Q9Y6V7 RPS24-214ENST00000613865 538 ntTSL 5 BASIC17.92■□□□□ 0.46
DDX49Q9Y6V7 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
DDX49Q9Y6V7 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
DDX49Q9Y6V7 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.92■□□□□ 0.46
DDX49Q9Y6V7 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
DDX49Q9Y6V7 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
DDX49Q9Y6V7 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.92■□□□□ 0.46
DDX49Q9Y6V7 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DDX49Q9Y6V7 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
DDX49Q9Y6V7 AC018442.1-201ENST00000421439 2061 ntBASIC17.92■□□□□ 0.46
DDX49Q9Y6V7 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
DDX49Q9Y6V7 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
DDX49Q9Y6V7 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DDX49Q9Y6V7 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
DDX49Q9Y6V7 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
DDX49Q9Y6V7 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.92■□□□□ 0.46
DDX49Q9Y6V7 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC17.92■□□□□ 0.46
DDX49Q9Y6V7 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
DDX49Q9Y6V7 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
DDX49Q9Y6V7 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DDX49Q9Y6V7 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
DDX49Q9Y6V7 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC17.92■□□□□ 0.46
DDX49Q9Y6V7 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DDX49Q9Y6V7 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
DDX49Q9Y6V7 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.91■□□□□ 0.46
DDX49Q9Y6V7 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms