Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC00474Q9P2X8 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC00474Q9P2X8 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LINC00474Q9P2X8 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC00474Q9P2X8 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC00474Q9P2X8 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC00474Q9P2X8 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC9.8□□□□□ -0.84
LINC00474Q9P2X8 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LINC00474Q9P2X8 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC9.8□□□□□ -0.84
LINC00474Q9P2X8 AC007787.1-201ENST00000588095 1583 ntBASIC9.8□□□□□ -0.84
LINC00474Q9P2X8 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
LINC00474Q9P2X8 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
LINC00474Q9P2X8 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 ZNF283-209ENST00000618787 5713 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 GALC-206ENST00000544807 2528 ntTSL 2 BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 IFT20-206ENST00000578122 834 ntTSL 2 BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 IFT20-208ENST00000578985 831 ntTSL 3 BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 AC023024.2-201ENST00000623561 1993 ntBASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 AC093525.8-201ENST00000624099 1342 ntBASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
LINC00474Q9P2X8 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC9.78□□□□□ -0.84
LINC00474Q9P2X8 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
LINC00474Q9P2X8 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
LINC00474Q9P2X8 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LINC00474Q9P2X8 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC9.78□□□□□ -0.84
LINC00474Q9P2X8 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LINC00474Q9P2X8 SON-203ENST00000381679 7860 ntTSL 5 BASIC9.78□□□□□ -0.84
LINC00474Q9P2X8 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
LINC00474Q9P2X8 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
LINC00474Q9P2X8 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LINC00474Q9P2X8 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC9.78□□□□□ -0.84
LINC00474Q9P2X8 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC9.78□□□□□ -0.84
LINC00474Q9P2X8 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
LINC00474Q9P2X8 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC9.78□□□□□ -0.84
LINC00474Q9P2X8 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LINC00474Q9P2X8 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LINC00474Q9P2X8 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms