Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
RAB40CQ96S21 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
RAB40CQ96S21 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.1□□□□□ -0.47
RAB40CQ96S21 AC012617.1-204ENST00000586340 2305 ntBASIC12.1□□□□□ -0.47
RAB40CQ96S21 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB40CQ96S21 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB40CQ96S21 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
RAB40CQ96S21 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB40CQ96S21 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB40CQ96S21 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB40CQ96S21 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB40CQ96S21 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
RAB40CQ96S21 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB40CQ96S21 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC12.1□□□□□ -0.47
RAB40CQ96S21 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB40CQ96S21 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
RAB40CQ96S21 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB40CQ96S21 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB40CQ96S21 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB40CQ96S21 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RAB40CQ96S21 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RAB40CQ96S21 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RAB40CQ96S21 AC211486.1-202ENST00000416371 468 ntBASIC12.1□□□□□ -0.47
RAB40CQ96S21 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC12.1□□□□□ -0.47
RAB40CQ96S21 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RAB40CQ96S21 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC12.1□□□□□ -0.47
RAB40CQ96S21 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB40CQ96S21 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC12.1□□□□□ -0.47
RAB40CQ96S21 AC211476.1-201ENST00000503899 468 ntBASIC12.1□□□□□ -0.47
RAB40CQ96S21 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC12.1□□□□□ -0.47
RAB40CQ96S21 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC12.1□□□□□ -0.47
RAB40CQ96S21 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC12.1□□□□□ -0.47
RAB40CQ96S21 AC022145.2-201ENST00000598203 171 ntBASIC12.1□□□□□ -0.47
RAB40CQ96S21 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RAB40CQ96S21 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.1□□□□□ -0.47
RAB40CQ96S21 AC015909.5-201ENST00000624336 2266 ntBASIC12.1□□□□□ -0.47
RAB40CQ96S21 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB40CQ96S21 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RAB40CQ96S21 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB40CQ96S21 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RAB40CQ96S21 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.1□□□□□ -0.47
RAB40CQ96S21 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
RAB40CQ96S21 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.1□□□□□ -0.47
RAB40CQ96S21 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.1□□□□□ -0.47
RAB40CQ96S21 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.1□□□□□ -0.47
RAB40CQ96S21 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
RAB40CQ96S21 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RAB40CQ96S21 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB40CQ96S21 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RAB40CQ96S21 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.1□□□□□ -0.47
RAB40CQ96S21 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB40CQ96S21 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.1□□□□□ -0.47
RAB40CQ96S21 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB40CQ96S21 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB40CQ96S21 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC12.1□□□□□ -0.47
RAB40CQ96S21 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RAB40CQ96S21 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB40CQ96S21 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RAB40CQ96S21 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB40CQ96S21 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RAB40CQ96S21 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB40CQ96S21 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
RAB40CQ96S21 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB40CQ96S21 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RAB40CQ96S21 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RAB40CQ96S21 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB40CQ96S21 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB40CQ96S21 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB40CQ96S21 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB40CQ96S21 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB40CQ96S21 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RAB40CQ96S21 AL645937.2-201ENST00000396808 931 ntBASIC12.09□□□□□ -0.47
RAB40CQ96S21 KRT18P13-201ENST00000400056 1290 ntBASIC12.09□□□□□ -0.47
RAB40CQ96S21 KRT18P32-201ENST00000424695 1287 ntBASIC12.09□□□□□ -0.47
RAB40CQ96S21 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC12.09□□□□□ -0.47
RAB40CQ96S21 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC12.09□□□□□ -0.47
RAB40CQ96S21 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.09□□□□□ -0.47
RAB40CQ96S21 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
RAB40CQ96S21 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RAB40CQ96S21 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC12.09□□□□□ -0.47
RAB40CQ96S21 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
RAB40CQ96S21 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.09□□□□□ -0.47
RAB40CQ96S21 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC12.09□□□□□ -0.47
RAB40CQ96S21 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
RAB40CQ96S21 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB40CQ96S21 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.09□□□□□ -0.47
RAB40CQ96S21 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB40CQ96S21 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB40CQ96S21 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RAB40CQ96S21 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RAB40CQ96S21 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.09□□□□□ -0.47
RAB40CQ96S21 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RAB40CQ96S21 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB40CQ96S21 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.09□□□□□ -0.47
RAB40CQ96S21 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.09□□□□□ -0.47
RAB40CQ96S21 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB40CQ96S21 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RAB40CQ96S21 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB40CQ96S21 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RAB40CQ96S21 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms