Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC17.02■□□□□ 0.31
CDCA5Q96FF9 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CDCA5Q96FF9 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDCA5Q96FF9 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC17.02■□□□□ 0.31
CDCA5Q96FF9 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDCA5Q96FF9 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CDCA5Q96FF9 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDCA5Q96FF9 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
CDCA5Q96FF9 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDCA5Q96FF9 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDCA5Q96FF9 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDCA5Q96FF9 AL591122.2-201ENST00000624125 1853 ntBASIC17.01■□□□□ 0.31
CDCA5Q96FF9 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDCA5Q96FF9 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC17.01■□□□□ 0.31
CDCA5Q96FF9 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC17.01■□□□□ 0.31
CDCA5Q96FF9 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDCA5Q96FF9 C18orf15-201ENST00000623680 2534 ntBASIC17.01■□□□□ 0.31
CDCA5Q96FF9 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC17.01■□□□□ 0.31
CDCA5Q96FF9 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDCA5Q96FF9 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CDCA5Q96FF9 AC004554.1-201ENST00000422830 1468 ntBASIC17.01■□□□□ 0.31
CDCA5Q96FF9 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
CDCA5Q96FF9 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDCA5Q96FF9 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDCA5Q96FF9 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC17.01■□□□□ 0.31
CDCA5Q96FF9 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CDCA5Q96FF9 RNVU1-8-201ENST00000364272 125 ntBASIC17.01■□□□□ 0.31
CDCA5Q96FF9 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
CDCA5Q96FF9 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDCA5Q96FF9 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDCA5Q96FF9 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC17.01■□□□□ 0.31
CDCA5Q96FF9 GDNF-207ENST00000515058 764 ntTSL 5 BASIC17.01■□□□□ 0.31
CDCA5Q96FF9 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC17.01■□□□□ 0.31
CDCA5Q96FF9 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC17.01■□□□□ 0.31
CDCA5Q96FF9 SRP14-204ENST00000558720 780 ntTSL 2 BASIC17.01■□□□□ 0.31
CDCA5Q96FF9 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC17.01■□□□□ 0.31
CDCA5Q96FF9 TRMT112P3-201ENST00000580149 358 ntBASIC17.01■□□□□ 0.31
CDCA5Q96FF9 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDCA5Q96FF9 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDCA5Q96FF9 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CDCA5Q96FF9 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDCA5Q96FF9 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC17.01■□□□□ 0.31
CDCA5Q96FF9 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.01■□□□□ 0.31
CDCA5Q96FF9 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.01■□□□□ 0.31
CDCA5Q96FF9 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDCA5Q96FF9 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.01■□□□□ 0.31
CDCA5Q96FF9 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDCA5Q96FF9 AC020658.6-201ENST00000623564 1870 ntBASIC17.01■□□□□ 0.31
CDCA5Q96FF9 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CDCA5Q96FF9 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC17■□□□□ 0.31
CDCA5Q96FF9 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDCA5Q96FF9 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CDCA5Q96FF9 AC112693.3-201ENST00000624819 1983 ntBASIC17■□□□□ 0.31
CDCA5Q96FF9 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC17■□□□□ 0.31
CDCA5Q96FF9 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17■□□□□ 0.31
CDCA5Q96FF9 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CDCA5Q96FF9 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CDCA5Q96FF9 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDCA5Q96FF9 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDCA5Q96FF9 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC17■□□□□ 0.31
CDCA5Q96FF9 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDCA5Q96FF9 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC17■□□□□ 0.31
CDCA5Q96FF9 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDCA5Q96FF9 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDCA5Q96FF9 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDCA5Q96FF9 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CDCA5Q96FF9 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
CDCA5Q96FF9 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17■□□□□ 0.31
CDCA5Q96FF9 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CDCA5Q96FF9 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDCA5Q96FF9 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC17■□□□□ 0.31
CDCA5Q96FF9 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC17■□□□□ 0.31
CDCA5Q96FF9 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC17■□□□□ 0.31
CDCA5Q96FF9 MIR1301-201ENST00000408518 82 ntBASIC17■□□□□ 0.31
CDCA5Q96FF9 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC17■□□□□ 0.31
CDCA5Q96FF9 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC17■□□□□ 0.31
CDCA5Q96FF9 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CDCA5Q96FF9 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC17■□□□□ 0.31
CDCA5Q96FF9 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDCA5Q96FF9 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC17■□□□□ 0.31
CDCA5Q96FF9 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC17■□□□□ 0.31
CDCA5Q96FF9 CYP4F36P-201ENST00000589193 186 ntBASIC17■□□□□ 0.31
CDCA5Q96FF9 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC17■□□□□ 0.31
CDCA5Q96FF9 AL627230.2-201ENST00000613254 655 ntBASIC17■□□□□ 0.31
CDCA5Q96FF9 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDCA5Q96FF9 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDCA5Q96FF9 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDCA5Q96FF9 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDCA5Q96FF9 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDCA5Q96FF9 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17■□□□□ 0.31
CDCA5Q96FF9 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDCA5Q96FF9 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CDCA5Q96FF9 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC17■□□□□ 0.31
CDCA5Q96FF9 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDCA5Q96FF9 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDCA5Q96FF9 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDCA5Q96FF9 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDCA5Q96FF9 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CDCA5Q96FF9 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CDCA5Q96FF9 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms