Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 AC012313.10-201ENST00000623509 926 ntBASIC11.58□□□□□ -0.56
KCNIP4Q6PIL6 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC11.58□□□□□ -0.56
KCNIP4Q6PIL6 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC11.58□□□□□ -0.56
KCNIP4Q6PIL6 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
KCNIP4Q6PIL6 PLEC-202ENST00000345136 14803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
KCNIP4Q6PIL6 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
KCNIP4Q6PIL6 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC11.58□□□□□ -0.56
KCNIP4Q6PIL6 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC11.58□□□□□ -0.56
KCNIP4Q6PIL6 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC11.58□□□□□ -0.56
KCNIP4Q6PIL6 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
KCNIP4Q6PIL6 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
KCNIP4Q6PIL6 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
KCNIP4Q6PIL6 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC11.58□□□□□ -0.56
KCNIP4Q6PIL6 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
KCNIP4Q6PIL6 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
KCNIP4Q6PIL6 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
KCNIP4Q6PIL6 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
KCNIP4Q6PIL6 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
KCNIP4Q6PIL6 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC11.58□□□□□ -0.56
KCNIP4Q6PIL6 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
KCNIP4Q6PIL6 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
KCNIP4Q6PIL6 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
KCNIP4Q6PIL6 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC11.58□□□□□ -0.56
KCNIP4Q6PIL6 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC11.58□□□□□ -0.56
KCNIP4Q6PIL6 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
KCNIP4Q6PIL6 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC11.58□□□□□ -0.56
KCNIP4Q6PIL6 PLEC-208ENST00000436759 14787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
KCNIP4Q6PIL6 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
KCNIP4Q6PIL6 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
KCNIP4Q6PIL6 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 AL031708.1-201ENST00000454337 5326 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 CELF1-204ENST00000395290 7666 ntAPPRIS ALT1 TSL 2 BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 ZEB2-234ENST00000636413 8984 ntTSL 5 BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 AC111170.3-201ENST00000624282 2464 ntBASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 MRPL20P1-201ENST00000400819 433 ntBASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 TPM4P1-201ENST00000436100 807 ntBASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 RPS29-206ENST00000557111 488 ntTSL 2 BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 AL354702.1-201ENST00000442006 1960 ntBASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 CYP51A1P2-201ENST00000419457 1499 ntBASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC11.57□□□□□ -0.56
KCNIP4Q6PIL6 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
KCNIP4Q6PIL6 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
KCNIP4Q6PIL6 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC11.56□□□□□ -0.56
KCNIP4Q6PIL6 DLGAP1-212ENST00000515196 5314 ntTSL 2 BASIC11.56□□□□□ -0.56
KCNIP4Q6PIL6 AC073439.1-201ENST00000624121 1774 ntBASIC11.56□□□□□ -0.56
KCNIP4Q6PIL6 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
KCNIP4Q6PIL6 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
KCNIP4Q6PIL6 AGGF1P1-201ENST00000509500 2073 ntBASIC11.56□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms