Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDKL1Q00532 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.66□□□□□ -0.06
CDKL1Q00532 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKL1Q00532 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKL1Q00532 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.66□□□□□ -0.06
CDKL1Q00532 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDKL1Q00532 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKL1Q00532 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKL1Q00532 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.66□□□□□ -0.06
CDKL1Q00532 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDKL1Q00532 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKL1Q00532 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CDKL1Q00532 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKL1Q00532 DGCR5-201ENST00000399539 862 ntBASIC14.66□□□□□ -0.06
CDKL1Q00532 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKL1Q00532 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.66□□□□□ -0.06
CDKL1Q00532 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKL1Q00532 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.66□□□□□ -0.06
CDKL1Q00532 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.66□□□□□ -0.06
CDKL1Q00532 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.66□□□□□ -0.06
CDKL1Q00532 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.66□□□□□ -0.06
CDKL1Q00532 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.66□□□□□ -0.06
CDKL1Q00532 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.66□□□□□ -0.06
CDKL1Q00532 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDKL1Q00532 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CDKL1Q00532 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CDKL1Q00532 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKL1Q00532 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
CDKL1Q00532 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKL1Q00532 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CDKL1Q00532 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKL1Q00532 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKL1Q00532 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CDKL1Q00532 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKL1Q00532 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CDKL1Q00532 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.65□□□□□ -0.06
CDKL1Q00532 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKL1Q00532 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.65□□□□□ -0.06
CDKL1Q00532 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CDKL1Q00532 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.65□□□□□ -0.06
CDKL1Q00532 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CDKL1Q00532 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDKL1Q00532 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDKL1Q00532 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKL1Q00532 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDKL1Q00532 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKL1Q00532 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CDKL1Q00532 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.65□□□□□ -0.06
CDKL1Q00532 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
CDKL1Q00532 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDKL1Q00532 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.65□□□□□ -0.06
CDKL1Q00532 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
CDKL1Q00532 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDKL1Q00532 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.65□□□□□ -0.06
CDKL1Q00532 AC007969.1-201ENST00000433675 447 ntBASIC14.65□□□□□ -0.06
CDKL1Q00532 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CDKL1Q00532 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.65□□□□□ -0.06
CDKL1Q00532 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.65□□□□□ -0.06
CDKL1Q00532 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.65□□□□□ -0.06
CDKL1Q00532 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.65□□□□□ -0.06
CDKL1Q00532 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKL1Q00532 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CDKL1Q00532 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.65□□□□□ -0.06
CDKL1Q00532 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
CDKL1Q00532 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKL1Q00532 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKL1Q00532 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKL1Q00532 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
CDKL1Q00532 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
CDKL1Q00532 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDKL1Q00532 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKL1Q00532 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKL1Q00532 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKL1Q00532 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDKL1Q00532 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CDKL1Q00532 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CDKL1Q00532 AC011474.4-201ENST00000623523 2076 ntBASIC14.64□□□□□ -0.07
CDKL1Q00532 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKL1Q00532 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
CDKL1Q00532 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.64□□□□□ -0.07
CDKL1Q00532 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKL1Q00532 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKL1Q00532 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDKL1Q00532 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKL1Q00532 AC098614.1-201ENST00000368528 745 ntBASIC14.64□□□□□ -0.07
CDKL1Q00532 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKL1Q00532 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.64□□□□□ -0.07
CDKL1Q00532 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CDKL1Q00532 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKL1Q00532 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDKL1Q00532 BAATP1-201ENST00000412284 1225 ntBASIC14.64□□□□□ -0.07
CDKL1Q00532 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.64□□□□□ -0.07
CDKL1Q00532 AC012441.1-201ENST00000446669 685 ntBASIC14.64□□□□□ -0.07
CDKL1Q00532 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDKL1Q00532 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.64□□□□□ -0.07
CDKL1Q00532 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.64□□□□□ -0.07
CDKL1Q00532 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CDKL1Q00532 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDKL1Q00532 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKL1Q00532 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms