Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KRT6CP48668 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.47□□□□□ -0.09
KRT6CP48668 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KRT6CP48668 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
KRT6CP48668 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KRT6CP48668 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.47□□□□□ -0.09
KRT6CP48668 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
KRT6CP48668 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KRT6CP48668 PTENP1-202ENST00000532280 3996 ntBASIC14.47□□□□□ -0.09
KRT6CP48668 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KRT6CP48668 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
KRT6CP48668 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KRT6CP48668 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.47□□□□□ -0.09
KRT6CP48668 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.47□□□□□ -0.09
KRT6CP48668 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
KRT6CP48668 AC027601.5-201ENST00000624065 2482 ntBASIC14.47□□□□□ -0.09
KRT6CP48668 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
KRT6CP48668 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.47□□□□□ -0.09
KRT6CP48668 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KRT6CP48668 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
KRT6CP48668 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
KRT6CP48668 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.47□□□□□ -0.09
KRT6CP48668 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.47□□□□□ -0.09
KRT6CP48668 ACKR1-201ENST00000368121 1240 ntBASIC14.47□□□□□ -0.09
KRT6CP48668 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.47□□□□□ -0.09
KRT6CP48668 AC007969.1-201ENST00000433675 447 ntBASIC14.47□□□□□ -0.09
KRT6CP48668 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.47□□□□□ -0.09
KRT6CP48668 UGT1A2P-201ENST00000454886 866 ntBASIC14.47□□□□□ -0.09
KRT6CP48668 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.47□□□□□ -0.09
KRT6CP48668 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.47□□□□□ -0.09
KRT6CP48668 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.47□□□□□ -0.09
KRT6CP48668 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.47□□□□□ -0.09
KRT6CP48668 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KRT6CP48668 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
KRT6CP48668 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.47□□□□□ -0.09
KRT6CP48668 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.47□□□□□ -0.09
KRT6CP48668 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
KRT6CP48668 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
KRT6CP48668 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
KRT6CP48668 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KRT6CP48668 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KRT6CP48668 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KRT6CP48668 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
KRT6CP48668 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
KRT6CP48668 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KRT6CP48668 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
KRT6CP48668 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KRT6CP48668 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
KRT6CP48668 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KRT6CP48668 SALL4P5-201ENST00000419001 1760 ntBASIC14.47□□□□□ -0.09
KRT6CP48668 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.47□□□□□ -0.09
KRT6CP48668 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.47□□□□□ -0.09
KRT6CP48668 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KRT6CP48668 LINC01230-201ENST00000625222 3017 ntBASIC14.47□□□□□ -0.09
KRT6CP48668 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
KRT6CP48668 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.46□□□□□ -0.09
KRT6CP48668 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
KRT6CP48668 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
KRT6CP48668 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.46□□□□□ -0.09
KRT6CP48668 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
KRT6CP48668 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
KRT6CP48668 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
KRT6CP48668 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.46□□□□□ -0.09
KRT6CP48668 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.46□□□□□ -0.09
KRT6CP48668 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.46□□□□□ -0.09
KRT6CP48668 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
KRT6CP48668 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
KRT6CP48668 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
KRT6CP48668 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
KRT6CP48668 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.46□□□□□ -0.09
KRT6CP48668 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
KRT6CP48668 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.46□□□□□ -0.09
KRT6CP48668 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
KRT6CP48668 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
KRT6CP48668 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
KRT6CP48668 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
KRT6CP48668 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
KRT6CP48668 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
KRT6CP48668 MIR770-201ENST00000390219 98 ntBASIC14.46□□□□□ -0.09
KRT6CP48668 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
KRT6CP48668 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.46□□□□□ -0.09
KRT6CP48668 ACTBP8-201ENST00000403258 1108 ntBASIC14.46□□□□□ -0.09
KRT6CP48668 AC098850.1-201ENST00000419919 790 ntBASIC14.46□□□□□ -0.09
KRT6CP48668 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
KRT6CP48668 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.46□□□□□ -0.09
KRT6CP48668 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
KRT6CP48668 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.46□□□□□ -0.09
KRT6CP48668 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.46□□□□□ -0.09
KRT6CP48668 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
KRT6CP48668 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.46□□□□□ -0.09
KRT6CP48668 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.46□□□□□ -0.09
KRT6CP48668 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
KRT6CP48668 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
KRT6CP48668 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.46□□□□□ -0.09
KRT6CP48668 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.46□□□□□ -0.09
KRT6CP48668 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
KRT6CP48668 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
KRT6CP48668 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
KRT6CP48668 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.46□□□□□ -0.09
KRT6CP48668 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms