Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
MMP2P08253 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MMP2P08253 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
MMP2P08253 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.87□□□□□ -0.03
MMP2P08253 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.87□□□□□ -0.03
MMP2P08253 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MMP2P08253 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
MMP2P08253 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.87□□□□□ -0.03
MMP2P08253 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.87□□□□□ -0.03
MMP2P08253 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.87□□□□□ -0.03
MMP2P08253 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MMP2P08253 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.87□□□□□ -0.03
MMP2P08253 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
MMP2P08253 DUX4L46-201ENST00000566845 751 ntBASIC14.87□□□□□ -0.03
MMP2P08253 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.87□□□□□ -0.03
MMP2P08253 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MMP2P08253 EEF1DP1-201ENST00000585891 896 ntBASIC14.87□□□□□ -0.03
MMP2P08253 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
MMP2P08253 AC132192.2-201ENST00000596206 1147 ntBASIC14.87□□□□□ -0.03
MMP2P08253 MIR6074-201ENST00000612054 107 ntBASIC14.87□□□□□ -0.03
MMP2P08253 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.87□□□□□ -0.03
MMP2P08253 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MMP2P08253 HSPA7-201ENST00000445535 1927 ntBASIC14.87□□□□□ -0.03
MMP2P08253 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
MMP2P08253 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
MMP2P08253 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MMP2P08253 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.87□□□□□ -0.03
MMP2P08253 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MMP2P08253 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.87□□□□□ -0.03
MMP2P08253 AC027601.5-201ENST00000624065 2482 ntBASIC14.87□□□□□ -0.03
MMP2P08253 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MMP2P08253 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MMP2P08253 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.87□□□□□ -0.03
MMP2P08253 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MMP2P08253 AC152010.1-201ENST00000415779 2006 ntBASIC14.87□□□□□ -0.03
MMP2P08253 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MMP2P08253 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MMP2P08253 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
MMP2P08253 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
MMP2P08253 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.86□□□□□ -0.03
MMP2P08253 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MMP2P08253 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
MMP2P08253 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
MMP2P08253 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MMP2P08253 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.86□□□□□ -0.03
MMP2P08253 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
MMP2P08253 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.86□□□□□ -0.03
MMP2P08253 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
MMP2P08253 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MMP2P08253 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.86□□□□□ -0.03
MMP2P08253 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MMP2P08253 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MMP2P08253 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MMP2P08253 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.86□□□□□ -0.03
MMP2P08253 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MMP2P08253 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MMP2P08253 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.86□□□□□ -0.03
MMP2P08253 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC14.86□□□□□ -0.03
MMP2P08253 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
MMP2P08253 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MMP2P08253 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MMP2P08253 AL583810.1-201ENST00000553344 1045 ntBASIC14.86□□□□□ -0.03
MMP2P08253 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.86□□□□□ -0.03
MMP2P08253 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.86□□□□□ -0.03
MMP2P08253 SORD2P-201ENST00000558556 1069 ntBASIC14.86□□□□□ -0.03
MMP2P08253 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.86□□□□□ -0.03
MMP2P08253 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.86□□□□□ -0.03
MMP2P08253 AC244157.2-201ENST00000616239 1006 ntBASIC14.86□□□□□ -0.03
MMP2P08253 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
MMP2P08253 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.86□□□□□ -0.03
MMP2P08253 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.86□□□□□ -0.03
MMP2P08253 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MMP2P08253 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MMP2P08253 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
MMP2P08253 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MMP2P08253 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.86□□□□□ -0.03
MMP2P08253 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.86□□□□□ -0.03
MMP2P08253 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MMP2P08253 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MMP2P08253 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
MMP2P08253 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
MMP2P08253 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MMP2P08253 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MMP2P08253 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.85□□□□□ -0.03
MMP2P08253 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
MMP2P08253 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.85□□□□□ -0.03
MMP2P08253 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.85□□□□□ -0.03
MMP2P08253 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.85□□□□□ -0.03
MMP2P08253 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MMP2P08253 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
MMP2P08253 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MMP2P08253 AC079178.1-201ENST00000420915 656 ntBASIC14.85□□□□□ -0.03
MMP2P08253 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.85□□□□□ -0.03
MMP2P08253 FAM21FP-201ENST00000426241 1131 ntBASIC14.85□□□□□ -0.03
MMP2P08253 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
MMP2P08253 KLF2P1-201ENST00000447438 1042 ntBASIC14.85□□□□□ -0.03
MMP2P08253 AL035414.1-201ENST00000451327 857 ntBASIC14.85□□□□□ -0.03
MMP2P08253 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.85□□□□□ -0.03
MMP2P08253 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.85□□□□□ -0.03
MMP2P08253 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms