Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TRGV3P03979 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC11.75□□□□□ -0.53
TRGV3P03979 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC11.75□□□□□ -0.53
TRGV3P03979 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRGV3P03979 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRGV3P03979 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
TRGV3P03979 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRGV3P03979 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRGV3P03979 AC013726.1-201ENST00000563747 2285 ntBASIC11.75□□□□□ -0.53
TRGV3P03979 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRGV3P03979 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TRGV3P03979 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRGV3P03979 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRGV3P03979 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRGV3P03979 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
TRGV3P03979 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRGV3P03979 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC11.75□□□□□ -0.53
TRGV3P03979 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TRGV3P03979 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
TRGV3P03979 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
TRGV3P03979 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TRGV3P03979 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV3P03979 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC11.74□□□□□ -0.53
TRGV3P03979 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
TRGV3P03979 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC11.74□□□□□ -0.53
TRGV3P03979 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV3P03979 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV3P03979 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV3P03979 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
TRGV3P03979 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV3P03979 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV3P03979 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV3P03979 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV3P03979 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV3P03979 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
TRGV3P03979 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV3P03979 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV3P03979 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC11.74□□□□□ -0.53
TRGV3P03979 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV3P03979 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV3P03979 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC11.74□□□□□ -0.53
TRGV3P03979 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV3P03979 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV3P03979 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV3P03979 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
TRGV3P03979 MPV17-205ENST00000402310 906 ntTSL 5 BASIC11.74□□□□□ -0.53
TRGV3P03979 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV3P03979 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV3P03979 AC007969.1-201ENST00000433675 447 ntBASIC11.74□□□□□ -0.53
TRGV3P03979 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV3P03979 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC11.74□□□□□ -0.53
TRGV3P03979 CROCCP4-201ENST00000457096 498 ntBASIC11.74□□□□□ -0.53
TRGV3P03979 RNA5SP486-201ENST00000515961 83 ntBASIC11.74□□□□□ -0.53
TRGV3P03979 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC11.74□□□□□ -0.53
TRGV3P03979 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC11.74□□□□□ -0.53
TRGV3P03979 AC106886.1-201ENST00000568660 600 ntBASIC11.74□□□□□ -0.53
TRGV3P03979 GNRHR2-203ENST00000581100 1187 ntBASIC11.74□□□□□ -0.53
TRGV3P03979 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
TRGV3P03979 ECM1P1-201ENST00000604092 1279 ntBASIC11.74□□□□□ -0.53
TRGV3P03979 AC244669.2-201ENST00000612320 853 ntBASIC11.74□□□□□ -0.53
TRGV3P03979 ETV2-208ENST00000621247 941 ntTSL 5 BASIC11.74□□□□□ -0.53
TRGV3P03979 AC138951.2-201ENST00000623455 1161 ntBASIC11.74□□□□□ -0.53
TRGV3P03979 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC11.74□□□□□ -0.53
TRGV3P03979 FUK-202ENST00000378912 3925 ntTSL 2 BASIC11.74□□□□□ -0.53
TRGV3P03979 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC11.74□□□□□ -0.53
TRGV3P03979 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC11.74□□□□□ -0.53
TRGV3P03979 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC11.74□□□□□ -0.53
TRGV3P03979 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV3P03979 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV3P03979 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV3P03979 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
TRGV3P03979 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV3P03979 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
TRGV3P03979 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV3P03979 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV3P03979 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC11.74□□□□□ -0.53
TRGV3P03979 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV3P03979 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV3P03979 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV3P03979 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
TRGV3P03979 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
TRGV3P03979 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV3P03979 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
TRGV3P03979 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV3P03979 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
TRGV3P03979 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TRGV3P03979 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC11.73□□□□□ -0.53
TRGV3P03979 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRGV3P03979 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRGV3P03979 AC015656.1-201ENST00000624209 3578 ntBASIC11.73□□□□□ -0.53
TRGV3P03979 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRGV3P03979 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRGV3P03979 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRGV3P03979 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TRGV3P03979 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRGV3P03979 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRGV3P03979 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRGV3P03979 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRGV3P03979 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TRGV3P03979 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms