Protein–RNA interactions for Protein: O60486

PLXNC1, Plexin-C1, humanhuman

Predictions only

Length 1,568 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNC1O60486 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PLXNC1O60486 AC113935.1-201ENST00000471722 555 ntBASIC21.35■■□□□ 1.01
PLXNC1O60486 FOXN3-AS2-201ENST00000554071 1262 ntBASIC21.35■■□□□ 1.01
PLXNC1O60486 NT5C-204ENST00000578337 582 ntTSL 2 BASIC21.35■■□□□ 1.01
PLXNC1O60486 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC21.35■■□□□ 1.01
PLXNC1O60486 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC21.35■■□□□ 1.01
PLXNC1O60486 AC006548.2-201ENST00000605217 529 ntBASIC21.35■■□□□ 1.01
PLXNC1O60486 TP53-221ENST00000615910 1149 ntTSL 5 BASIC21.35■■□□□ 1.01
PLXNC1O60486 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PLXNC1O60486 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC21.35■■□□□ 1.01
PLXNC1O60486 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC21.35■■□□□ 1.01
PLXNC1O60486 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PLXNC1O60486 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
PLXNC1O60486 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PLXNC1O60486 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PLXNC1O60486 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PLXNC1O60486 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PLXNC1O60486 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PLXNC1O60486 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PLXNC1O60486 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC21.34■■□□□ 1.01
PLXNC1O60486 FUCA1P1-201ENST00000374476 1351 ntBASIC21.34■■□□□ 1.01
PLXNC1O60486 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
PLXNC1O60486 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PLXNC1O60486 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PLXNC1O60486 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PLXNC1O60486 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC21.34■■□□□ 1.01
PLXNC1O60486 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
PLXNC1O60486 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
PLXNC1O60486 GEMIN8P4-201ENST00000380526 729 ntBASIC21.34■■□□□ 1.01
PLXNC1O60486 MIR566-201ENST00000385187 94 ntBASIC21.34■■□□□ 1.01
PLXNC1O60486 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC21.34■■□□□ 1.01
PLXNC1O60486 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC21.34■■□□□ 1.01
PLXNC1O60486 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC21.34■■□□□ 1.01
PLXNC1O60486 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC21.34■■□□□ 1.01
PLXNC1O60486 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
PLXNC1O60486 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PLXNC1O60486 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
PLXNC1O60486 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PLXNC1O60486 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PLXNC1O60486 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC21.34■■□□□ 1.01
PLXNC1O60486 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC21.34■■□□□ 1.01
PLXNC1O60486 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC21.34■■□□□ 1.01
PLXNC1O60486 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PLXNC1O60486 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
PLXNC1O60486 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PLXNC1O60486 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
PLXNC1O60486 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC21.33■■□□□ 1.01
PLXNC1O60486 RN7SL788P-201ENST00000460504 316 ntBASIC21.33■■□□□ 1.01
PLXNC1O60486 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
PLXNC1O60486 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC21.33■■□□□ 1.01
PLXNC1O60486 AC005740.1-201ENST00000515639 522 ntBASIC21.33■■□□□ 1.01
PLXNC1O60486 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
PLXNC1O60486 F11R-204ENST00000537746 1245 ntTSL 2 BASIC21.33■■□□□ 1.01
PLXNC1O60486 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
PLXNC1O60486 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC21.33■■□□□ 1.01
PLXNC1O60486 AL627230.2-201ENST00000613254 655 ntBASIC21.33■■□□□ 1.01
PLXNC1O60486 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC21.33■■□□□ 1.01
PLXNC1O60486 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC21.33■■□□□ 1
PLXNC1O60486 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC21.33■■□□□ 1
PLXNC1O60486 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PLXNC1O60486 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PLXNC1O60486 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC21.33■■□□□ 1
PLXNC1O60486 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1
PLXNC1O60486 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
PLXNC1O60486 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC21.33■■□□□ 1
PLXNC1O60486 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC21.33■■□□□ 1
PLXNC1O60486 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC21.32■■□□□ 1
PLXNC1O60486 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
PLXNC1O60486 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
PLXNC1O60486 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PLXNC1O60486 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
PLXNC1O60486 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PLXNC1O60486 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC21.32■■□□□ 1
PLXNC1O60486 RN7SL582P-201ENST00000491078 279 ntBASIC21.32■■□□□ 1
PLXNC1O60486 CISD2-202ENST00000503643 808 ntTSL 2 BASIC21.32■■□□□ 1
PLXNC1O60486 KRT8P43-201ENST00000406052 1458 ntBASIC21.32■■□□□ 1
PLXNC1O60486 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
PLXNC1O60486 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
PLXNC1O60486 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
PLXNC1O60486 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PLXNC1O60486 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC21.32■■□□□ 1
PLXNC1O60486 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PLXNC1O60486 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC21.32■■□□□ 1
PLXNC1O60486 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
PLXNC1O60486 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC21.32■■□□□ 1
PLXNC1O60486 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC21.31■■□□□ 1
PLXNC1O60486 AC106827.1-201ENST00000366454 431 ntBASIC21.31■■□□□ 1
PLXNC1O60486 RN7SL767P-201ENST00000493013 295 ntBASIC21.31■■□□□ 1
PLXNC1O60486 GDNF-207ENST00000515058 764 ntTSL 5 BASIC21.31■■□□□ 1
PLXNC1O60486 AL132994.1-201ENST00000554098 400 ntBASIC21.31■■□□□ 1
PLXNC1O60486 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC21.31■■□□□ 1
PLXNC1O60486 PLS3-210ENST00000626746 216 ntTSL 4 BASIC21.31■■□□□ 1
PLXNC1O60486 GPI-205ENST00000586425 1799 ntTSL 5 BASIC21.31■■□□□ 1
PLXNC1O60486 AMT-256ENST00000638063 1783 ntTSL 5 BASIC21.31■■□□□ 1
PLXNC1O60486 AL109809.1-201ENST00000418979 1367 ntBASIC21.31■■□□□ 1
PLXNC1O60486 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
PLXNC1O60486 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
PLXNC1O60486 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC21.31■■□□□ 1
PLXNC1O60486 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC21.31■■□□□ 1
PLXNC1O60486 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms