Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDC7O00311 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDC7O00311 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
CDC7O00311 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDC7O00311 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.59□□□□□ -0.07
CDC7O00311 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.59□□□□□ -0.07
CDC7O00311 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDC7O00311 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CDC7O00311 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDC7O00311 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.59□□□□□ -0.07
CDC7O00311 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CDC7O00311 MYADML-201ENST00000474610 2147 ntBASIC14.59□□□□□ -0.07
CDC7O00311 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CDC7O00311 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.59□□□□□ -0.07
CDC7O00311 AC015688.4-201ENST00000580780 1647 ntBASIC14.59□□□□□ -0.07
CDC7O00311 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.59□□□□□ -0.07
CDC7O00311 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.59□□□□□ -0.07
CDC7O00311 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CDC7O00311 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
CDC7O00311 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.58□□□□□ -0.08
CDC7O00311 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDC7O00311 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDC7O00311 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDC7O00311 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDC7O00311 AC041040.2-201ENST00000622926 2899 ntBASIC14.58□□□□□ -0.08
CDC7O00311 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDC7O00311 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.58□□□□□ -0.08
CDC7O00311 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDC7O00311 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.58□□□□□ -0.08
CDC7O00311 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.58□□□□□ -0.08
CDC7O00311 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDC7O00311 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.58□□□□□ -0.08
CDC7O00311 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.58□□□□□ -0.08
CDC7O00311 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.58□□□□□ -0.08
CDC7O00311 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.58□□□□□ -0.08
CDC7O00311 RN7SL752P-201ENST00000463779 287 ntBASIC14.58□□□□□ -0.08
CDC7O00311 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.58□□□□□ -0.08
CDC7O00311 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
CDC7O00311 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
CDC7O00311 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.58□□□□□ -0.08
CDC7O00311 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.58□□□□□ -0.08
CDC7O00311 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.58□□□□□ -0.08
CDC7O00311 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.58□□□□□ -0.08
CDC7O00311 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDC7O00311 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDC7O00311 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDC7O00311 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDC7O00311 AC005840.4-201ENST00000541242 2494 ntBASIC14.58□□□□□ -0.08
CDC7O00311 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.58□□□□□ -0.08
CDC7O00311 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CDC7O00311 FKBP4P6-201ENST00000457486 1332 ntBASIC14.58□□□□□ -0.08
CDC7O00311 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDC7O00311 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
CDC7O00311 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDC7O00311 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.58□□□□□ -0.08
CDC7O00311 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CDC7O00311 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDC7O00311 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDC7O00311 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDC7O00311 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC7O00311 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC7O00311 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDC7O00311 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CDC7O00311 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC7O00311 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDC7O00311 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.57□□□□□ -0.08
CDC7O00311 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CDC7O00311 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC7O00311 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDC7O00311 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC7O00311 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC7O00311 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDC7O00311 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
CDC7O00311 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDC7O00311 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC7O00311 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CDC7O00311 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC7O00311 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC7O00311 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC7O00311 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC7O00311 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC7O00311 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDC7O00311 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDC7O00311 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
CDC7O00311 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CDC7O00311 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.57□□□□□ -0.08
CDC7O00311 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.57□□□□□ -0.08
CDC7O00311 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC7O00311 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CDC7O00311 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.57□□□□□ -0.08
CDC7O00311 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.57□□□□□ -0.08
CDC7O00311 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.57□□□□□ -0.08
CDC7O00311 GNRHR2-203ENST00000581100 1187 ntBASIC14.57□□□□□ -0.08
CDC7O00311 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.57□□□□□ -0.08
CDC7O00311 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.57□□□□□ -0.08
CDC7O00311 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
CDC7O00311 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CDC7O00311 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CDC7O00311 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.57□□□□□ -0.08
CDC7O00311 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms