Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPH3AQ9Y2J0 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.74□□□□□ -0.21
RPH3AQ9Y2J0 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPH3AQ9Y2J0 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPH3AQ9Y2J0 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPH3AQ9Y2J0 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPH3AQ9Y2J0 TPM3P8-201ENST00000330554 643 ntBASIC13.74□□□□□ -0.21
RPH3AQ9Y2J0 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPH3AQ9Y2J0 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPH3AQ9Y2J0 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
RPH3AQ9Y2J0 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.74□□□□□ -0.21
RPH3AQ9Y2J0 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.74□□□□□ -0.21
RPH3AQ9Y2J0 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
RPH3AQ9Y2J0 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RPH3AQ9Y2J0 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.74□□□□□ -0.21
RPH3AQ9Y2J0 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.74□□□□□ -0.21
RPH3AQ9Y2J0 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.74□□□□□ -0.21
RPH3AQ9Y2J0 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RPH3AQ9Y2J0 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPH3AQ9Y2J0 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC13.74□□□□□ -0.21
RPH3AQ9Y2J0 AL583810.1-201ENST00000553344 1045 ntBASIC13.74□□□□□ -0.21
RPH3AQ9Y2J0 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.74□□□□□ -0.21
RPH3AQ9Y2J0 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.74□□□□□ -0.21
RPH3AQ9Y2J0 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.74□□□□□ -0.21
RPH3AQ9Y2J0 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.74□□□□□ -0.21
RPH3AQ9Y2J0 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.74□□□□□ -0.21
RPH3AQ9Y2J0 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPH3AQ9Y2J0 AC138951.2-201ENST00000623455 1161 ntBASIC13.74□□□□□ -0.21
RPH3AQ9Y2J0 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.74□□□□□ -0.21
RPH3AQ9Y2J0 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPH3AQ9Y2J0 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC13.74□□□□□ -0.21
RPH3AQ9Y2J0 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.74□□□□□ -0.21
RPH3AQ9Y2J0 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPH3AQ9Y2J0 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RPH3AQ9Y2J0 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.74□□□□□ -0.21
RPH3AQ9Y2J0 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.74□□□□□ -0.21
RPH3AQ9Y2J0 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RPH3AQ9Y2J0 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPH3AQ9Y2J0 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.74□□□□□ -0.21
RPH3AQ9Y2J0 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.74□□□□□ -0.21
RPH3AQ9Y2J0 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.74□□□□□ -0.21
RPH3AQ9Y2J0 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPH3AQ9Y2J0 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPH3AQ9Y2J0 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RPH3AQ9Y2J0 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RPH3AQ9Y2J0 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPH3AQ9Y2J0 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RPH3AQ9Y2J0 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 RPL7P3-201ENST00000441388 714 ntBASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms