Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC12.33□□□□□ -0.44
CALYQ9NYX4 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.33□□□□□ -0.44
CALYQ9NYX4 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
CALYQ9NYX4 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CALYQ9NYX4 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CALYQ9NYX4 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
CALYQ9NYX4 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CALYQ9NYX4 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CALYQ9NYX4 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CALYQ9NYX4 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CALYQ9NYX4 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.33□□□□□ -0.44
CALYQ9NYX4 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
CALYQ9NYX4 CLUHP2-201ENST00000426660 1303 ntBASIC12.33□□□□□ -0.44
CALYQ9NYX4 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CALYQ9NYX4 AGGF1P1-201ENST00000509500 2073 ntBASIC12.33□□□□□ -0.44
CALYQ9NYX4 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CALYQ9NYX4 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CALYQ9NYX4 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CALYQ9NYX4 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CALYQ9NYX4 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CALYQ9NYX4 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CALYQ9NYX4 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CALYQ9NYX4 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CALYQ9NYX4 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.32□□□□□ -0.44
CALYQ9NYX4 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC12.32□□□□□ -0.44
CALYQ9NYX4 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC12.32□□□□□ -0.44
CALYQ9NYX4 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CALYQ9NYX4 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CALYQ9NYX4 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CALYQ9NYX4 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.32□□□□□ -0.44
CALYQ9NYX4 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC12.32□□□□□ -0.44
CALYQ9NYX4 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
CALYQ9NYX4 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CALYQ9NYX4 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CALYQ9NYX4 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CALYQ9NYX4 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CALYQ9NYX4 SNX18-202ENST00000343017 3140 ntBASIC12.32□□□□□ -0.44
CALYQ9NYX4 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CALYQ9NYX4 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
CALYQ9NYX4 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
CALYQ9NYX4 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CALYQ9NYX4 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.32□□□□□ -0.44
CALYQ9NYX4 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CALYQ9NYX4 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
CALYQ9NYX4 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CALYQ9NYX4 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CALYQ9NYX4 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CALYQ9NYX4 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CALYQ9NYX4 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CALYQ9NYX4 GUK1-206ENST00000366723 845 ntTSL 5 BASIC12.32□□□□□ -0.44
CALYQ9NYX4 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CALYQ9NYX4 AC005229.1-201ENST00000392885 409 ntBASIC12.32□□□□□ -0.44
CALYQ9NYX4 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CALYQ9NYX4 TTTY23B-201ENST00000442790 549 ntBASIC12.32□□□□□ -0.44
CALYQ9NYX4 INE1-201ENST00000456273 945 ntBASIC12.32□□□□□ -0.44
CALYQ9NYX4 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CALYQ9NYX4 LHX6-205ENST00000464484 666 ntTSL 2 BASIC12.32□□□□□ -0.44
CALYQ9NYX4 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC12.32□□□□□ -0.44
CALYQ9NYX4 MESTP3-201ENST00000503460 968 ntBASIC12.32□□□□□ -0.44
CALYQ9NYX4 FTLP10-202ENST00000505798 471 ntBASIC12.32□□□□□ -0.44
CALYQ9NYX4 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
CALYQ9NYX4 AC131206.1-201ENST00000538078 1211 ntBASIC12.32□□□□□ -0.44
CALYQ9NYX4 MIR3197-201ENST00000582241 73 ntBASIC12.32□□□□□ -0.44
CALYQ9NYX4 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC12.32□□□□□ -0.44
CALYQ9NYX4 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CALYQ9NYX4 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC12.32□□□□□ -0.44
CALYQ9NYX4 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
CALYQ9NYX4 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.32□□□□□ -0.44
CALYQ9NYX4 AC138696.2-201ENST00000607376 223 ntBASIC12.32□□□□□ -0.44
CALYQ9NYX4 AC138466.3-201ENST00000619983 221 ntBASIC12.32□□□□□ -0.44
CALYQ9NYX4 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC12.32□□□□□ -0.44
CALYQ9NYX4 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CALYQ9NYX4 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.32□□□□□ -0.44
CALYQ9NYX4 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CALYQ9NYX4 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CALYQ9NYX4 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CALYQ9NYX4 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CALYQ9NYX4 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CALYQ9NYX4 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
CALYQ9NYX4 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CALYQ9NYX4 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CALYQ9NYX4 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CALYQ9NYX4 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CALYQ9NYX4 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CALYQ9NYX4 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC12.32□□□□□ -0.44
CALYQ9NYX4 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
CALYQ9NYX4 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC12.32□□□□□ -0.44
CALYQ9NYX4 AC011840.2-201ENST00000563063 1520 ntBASIC12.32□□□□□ -0.44
CALYQ9NYX4 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CALYQ9NYX4 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CALYQ9NYX4 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CALYQ9NYX4 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC12.31□□□□□ -0.44
CALYQ9NYX4 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CALYQ9NYX4 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC12.31□□□□□ -0.44
CALYQ9NYX4 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CALYQ9NYX4 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CALYQ9NYX4 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC12.31□□□□□ -0.44
CALYQ9NYX4 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CALYQ9NYX4 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CALYQ9NYX4 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms