Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 HLA-J-203ENST00000494367 1087 ntBASIC12.82□□□□□ -0.36
NICN1Q9BSH3 AC069120.2-201ENST00000524091 540 ntBASIC12.82□□□□□ -0.36
NICN1Q9BSH3 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.81□□□□□ -0.36
NICN1Q9BSH3 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
NICN1Q9BSH3 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NICN1Q9BSH3 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NICN1Q9BSH3 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NICN1Q9BSH3 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.81□□□□□ -0.36
NICN1Q9BSH3 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NICN1Q9BSH3 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NICN1Q9BSH3 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NICN1Q9BSH3 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NICN1Q9BSH3 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NICN1Q9BSH3 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NICN1Q9BSH3 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NICN1Q9BSH3 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NICN1Q9BSH3 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NICN1Q9BSH3 AC107918.4-201ENST00000641966 3141 ntBASIC12.81□□□□□ -0.36
NICN1Q9BSH3 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NICN1Q9BSH3 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NICN1Q9BSH3 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NICN1Q9BSH3 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
NICN1Q9BSH3 AL353779.1-201ENST00000434793 351 ntBASIC12.81□□□□□ -0.36
NICN1Q9BSH3 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC12.81□□□□□ -0.36
NICN1Q9BSH3 CNN2P2-201ENST00000443536 909 ntBASIC12.81□□□□□ -0.36
NICN1Q9BSH3 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC12.81□□□□□ -0.36
NICN1Q9BSH3 CNN2P3-201ENST00000450201 906 ntBASIC12.81□□□□□ -0.36
NICN1Q9BSH3 SLBP-205ENST00000488267 987 ntTSL 2 BASIC12.81□□□□□ -0.36
NICN1Q9BSH3 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC12.81□□□□□ -0.36
NICN1Q9BSH3 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.81□□□□□ -0.36
NICN1Q9BSH3 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC12.81□□□□□ -0.36
NICN1Q9BSH3 MPI-209ENST00000564003 1195 ntTSL 2 BASIC12.81□□□□□ -0.36
NICN1Q9BSH3 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
NICN1Q9BSH3 AC092337.1-201ENST00000568699 1129 ntBASIC12.81□□□□□ -0.36
NICN1Q9BSH3 AL596442.2-201ENST00000610240 980 ntBASIC12.81□□□□□ -0.36
NICN1Q9BSH3 AL136317.3-201ENST00000618497 906 ntBASIC12.81□□□□□ -0.36
NICN1Q9BSH3 RAB34-223ENST00000636154 730 ntTSL 2 BASIC12.81□□□□□ -0.36
NICN1Q9BSH3 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NICN1Q9BSH3 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
NICN1Q9BSH3 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NICN1Q9BSH3 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NICN1Q9BSH3 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NICN1Q9BSH3 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.81□□□□□ -0.36
NICN1Q9BSH3 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NICN1Q9BSH3 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NICN1Q9BSH3 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NICN1Q9BSH3 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NICN1Q9BSH3 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC12.81□□□□□ -0.36
NICN1Q9BSH3 AL731571.1-201ENST00000617058 5428 ntBASIC12.81□□□□□ -0.36
NICN1Q9BSH3 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
NICN1Q9BSH3 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NICN1Q9BSH3 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NICN1Q9BSH3 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC12.81□□□□□ -0.36
NICN1Q9BSH3 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.81□□□□□ -0.36
NICN1Q9BSH3 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
NICN1Q9BSH3 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NICN1Q9BSH3 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
NICN1Q9BSH3 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC12.8□□□□□ -0.36
NICN1Q9BSH3 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NICN1Q9BSH3 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NICN1Q9BSH3 CICP17-201ENST00000418553 2377 ntBASIC12.8□□□□□ -0.36
NICN1Q9BSH3 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NICN1Q9BSH3 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
NICN1Q9BSH3 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NICN1Q9BSH3 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
NICN1Q9BSH3 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
NICN1Q9BSH3 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NICN1Q9BSH3 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.8□□□□□ -0.36
NICN1Q9BSH3 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.8□□□□□ -0.36
NICN1Q9BSH3 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
NICN1Q9BSH3 AL139400.1-201ENST00000366220 510 ntBASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 143.4 ms