Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SEC22CQ9BRL7 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.62□□□□□ -0.39
SEC22CQ9BRL7 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SEC22CQ9BRL7 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SEC22CQ9BRL7 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SEC22CQ9BRL7 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.62□□□□□ -0.39
SEC22CQ9BRL7 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC12.62□□□□□ -0.39
SEC22CQ9BRL7 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SEC22CQ9BRL7 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SEC22CQ9BRL7 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SEC22CQ9BRL7 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SEC22CQ9BRL7 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC12.62□□□□□ -0.39
SEC22CQ9BRL7 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC12.62□□□□□ -0.39
SEC22CQ9BRL7 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SEC22CQ9BRL7 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
SEC22CQ9BRL7 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 CRYGEP-201ENST00000412192 528 ntBASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 HNRNPDP1-201ENST00000439535 754 ntBASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 IFNL4P1-201ENST00000607083 540 ntBASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC12.61□□□□□ -0.39
SEC22CQ9BRL7 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SEC22CQ9BRL7 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SEC22CQ9BRL7 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
SEC22CQ9BRL7 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
SEC22CQ9BRL7 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SEC22CQ9BRL7 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SEC22CQ9BRL7 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
SEC22CQ9BRL7 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC12.6□□□□□ -0.39
SEC22CQ9BRL7 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SEC22CQ9BRL7 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SEC22CQ9BRL7 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC12.6□□□□□ -0.39
SEC22CQ9BRL7 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
SEC22CQ9BRL7 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SEC22CQ9BRL7 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SEC22CQ9BRL7 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC12.6□□□□□ -0.39
SEC22CQ9BRL7 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.6□□□□□ -0.39
SEC22CQ9BRL7 AL157414.3-201ENST00000624276 1954 ntBASIC12.6□□□□□ -0.39
SEC22CQ9BRL7 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SEC22CQ9BRL7 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.6□□□□□ -0.39
SEC22CQ9BRL7 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
SEC22CQ9BRL7 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
SEC22CQ9BRL7 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SEC22CQ9BRL7 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
SEC22CQ9BRL7 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
SEC22CQ9BRL7 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SEC22CQ9BRL7 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms