Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 AC019294.4-201ENST00000561777 2905 ntBASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 AC112482.1-201ENST00000492080 688 ntBASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 AL157414.3-201ENST00000624276 1954 ntBASIC12.8□□□□□ -0.36
CMSS1Q9BQ75 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC12.79□□□□□ -0.36
CMSS1Q9BQ75 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CMSS1Q9BQ75 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.79□□□□□ -0.36
CMSS1Q9BQ75 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.79□□□□□ -0.36
CMSS1Q9BQ75 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CMSS1Q9BQ75 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CMSS1Q9BQ75 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CMSS1Q9BQ75 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CMSS1Q9BQ75 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CMSS1Q9BQ75 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CMSS1Q9BQ75 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CMSS1Q9BQ75 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.79□□□□□ -0.36
CMSS1Q9BQ75 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.79□□□□□ -0.36
CMSS1Q9BQ75 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CMSS1Q9BQ75 AC092135.3-201ENST00000624151 1846 ntBASIC12.79□□□□□ -0.36
CMSS1Q9BQ75 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
CMSS1Q9BQ75 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CMSS1Q9BQ75 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
CMSS1Q9BQ75 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CMSS1Q9BQ75 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CMSS1Q9BQ75 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CMSS1Q9BQ75 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CMSS1Q9BQ75 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC12.79□□□□□ -0.36
CMSS1Q9BQ75 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CMSS1Q9BQ75 HNRNPFP1-201ENST00000391730 1133 ntBASIC12.79□□□□□ -0.36
CMSS1Q9BQ75 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
CMSS1Q9BQ75 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC12.79□□□□□ -0.36
CMSS1Q9BQ75 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC12.79□□□□□ -0.36
CMSS1Q9BQ75 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC12.79□□□□□ -0.36
CMSS1Q9BQ75 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CMSS1Q9BQ75 AC022447.6-201ENST00000515522 438 ntBASIC12.79□□□□□ -0.36
CMSS1Q9BQ75 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC12.79□□□□□ -0.36
CMSS1Q9BQ75 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC12.79□□□□□ -0.36
CMSS1Q9BQ75 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
CMSS1Q9BQ75 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms