Protein–RNA interactions for Protein: Q8IYK2

CCDC105, Coiled-coil domain-containing protein 105, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC105Q8IYK2 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC105Q8IYK2 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC105Q8IYK2 TNN-203ENST00000622870 3719 ntTSL 5 BASIC16.13■□□□□ 0.17
CCDC105Q8IYK2 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CCDC105Q8IYK2 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC105Q8IYK2 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CCDC105Q8IYK2 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC105Q8IYK2 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC105Q8IYK2 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC105Q8IYK2 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC105Q8IYK2 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.13■□□□□ 0.17
CCDC105Q8IYK2 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC105Q8IYK2 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CCDC105Q8IYK2 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CCDC105Q8IYK2 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC105Q8IYK2 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC105Q8IYK2 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC105Q8IYK2 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC105Q8IYK2 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC16.12■□□□□ 0.17
CCDC105Q8IYK2 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC105Q8IYK2 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC105Q8IYK2 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC105Q8IYK2 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
CCDC105Q8IYK2 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC105Q8IYK2 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC105Q8IYK2 AC138028.6-201ENST00000616106 1482 ntBASIC16.12■□□□□ 0.17
CCDC105Q8IYK2 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC105Q8IYK2 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC105Q8IYK2 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CCDC105Q8IYK2 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC105Q8IYK2 AL662890.1-201ENST00000396818 632 ntBASIC16.12■□□□□ 0.17
CCDC105Q8IYK2 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC105Q8IYK2 HINT2P1-201ENST00000419438 481 ntBASIC16.12■□□□□ 0.17
CCDC105Q8IYK2 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC16.12■□□□□ 0.17
CCDC105Q8IYK2 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC105Q8IYK2 Z93015.1-201ENST00000451718 390 ntBASIC16.12■□□□□ 0.17
CCDC105Q8IYK2 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC16.12■□□□□ 0.17
CCDC105Q8IYK2 SCARNA20.5-201ENST00000516991 142 ntBASIC16.12■□□□□ 0.17
CCDC105Q8IYK2 AC023310.1-201ENST00000554836 735 ntBASIC16.12■□□□□ 0.17
CCDC105Q8IYK2 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC16.12■□□□□ 0.17
CCDC105Q8IYK2 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC16.12■□□□□ 0.17
CCDC105Q8IYK2 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.12■□□□□ 0.17
CCDC105Q8IYK2 MIR4722-201ENST00000578292 60 ntBASIC16.12■□□□□ 0.17
CCDC105Q8IYK2 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC105Q8IYK2 AL008638.5-201ENST00000623814 1298 ntBASIC16.12■□□□□ 0.17
CCDC105Q8IYK2 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC16.12■□□□□ 0.17
CCDC105Q8IYK2 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC105Q8IYK2 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC105Q8IYK2 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.12■□□□□ 0.17
CCDC105Q8IYK2 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC105Q8IYK2 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC105Q8IYK2 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC105Q8IYK2 GRN-222ENST00000639447 1314 ntTSL 2 BASIC16.12■□□□□ 0.17
CCDC105Q8IYK2 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC105Q8IYK2 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC105Q8IYK2 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.12■□□□□ 0.17
CCDC105Q8IYK2 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC105Q8IYK2 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.12■□□□□ 0.17
CCDC105Q8IYK2 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.12■□□□□ 0.17
CCDC105Q8IYK2 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC16.12■□□□□ 0.17
CCDC105Q8IYK2 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC105Q8IYK2 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC105Q8IYK2 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CCDC105Q8IYK2 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC105Q8IYK2 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC105Q8IYK2 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC105Q8IYK2 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.11■□□□□ 0.17
CCDC105Q8IYK2 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC105Q8IYK2 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC105Q8IYK2 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC105Q8IYK2 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC105Q8IYK2 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CCDC105Q8IYK2 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC105Q8IYK2 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC105Q8IYK2 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC105Q8IYK2 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC105Q8IYK2 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC105Q8IYK2 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC105Q8IYK2 RPS3-201ENST00000278572 907 ntTSL 3 BASIC16.11■□□□□ 0.17
CCDC105Q8IYK2 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC105Q8IYK2 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC105Q8IYK2 TOMM22P5-201ENST00000416399 439 ntBASIC16.11■□□□□ 0.17
CCDC105Q8IYK2 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC105Q8IYK2 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC105Q8IYK2 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC105Q8IYK2 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.11■□□□□ 0.17
CCDC105Q8IYK2 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC105Q8IYK2 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC105Q8IYK2 UPF3AP2-201ENST00000457924 1132 ntBASIC16.11■□□□□ 0.17
CCDC105Q8IYK2 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.11■□□□□ 0.17
CCDC105Q8IYK2 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC16.11■□□□□ 0.17
CCDC105Q8IYK2 AP001063.1-201ENST00000568332 529 ntBASIC16.11■□□□□ 0.17
CCDC105Q8IYK2 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC105Q8IYK2 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
CCDC105Q8IYK2 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC16.11■□□□□ 0.17
CCDC105Q8IYK2 AC005252.2-201ENST00000624630 1141 ntBASIC16.11■□□□□ 0.17
CCDC105Q8IYK2 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC105Q8IYK2 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CCDC105Q8IYK2 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC16.11■□□□□ 0.17
CCDC105Q8IYK2 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms