Protein–RNA interactions for Protein: P11047

LAMC1, Laminin subunit gamma-1, humanhuman

Predictions only

Length 1,609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMC1P11047 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
LAMC1P11047 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC20.49■□□□□ 0.87
LAMC1P11047 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC20.49■□□□□ 0.87
LAMC1P11047 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
LAMC1P11047 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LAMC1P11047 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC20.49■□□□□ 0.87
LAMC1P11047 AL161773.1-201ENST00000624845 863 ntBASIC20.49■□□□□ 0.87
LAMC1P11047 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
LAMC1P11047 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
LAMC1P11047 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC20.49■□□□□ 0.87
LAMC1P11047 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
LAMC1P11047 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
LAMC1P11047 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
LAMC1P11047 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
LAMC1P11047 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LAMC1P11047 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC20.49■□□□□ 0.87
LAMC1P11047 LINC00554-201ENST00000564841 3011 ntBASIC20.49■□□□□ 0.87
LAMC1P11047 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LAMC1P11047 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC20.49■□□□□ 0.87
LAMC1P11047 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
LAMC1P11047 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC20.49■□□□□ 0.87
LAMC1P11047 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LAMC1P11047 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC20.49■□□□□ 0.87
LAMC1P11047 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.49■□□□□ 0.87
LAMC1P11047 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
LAMC1P11047 RN7SL832P-201ENST00000607781 1756 ntBASIC20.49■□□□□ 0.87
LAMC1P11047 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LAMC1P11047 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC20.49■□□□□ 0.87
LAMC1P11047 BUD31-205ENST00000456893 512 ntTSL 5 BASIC20.49■□□□□ 0.87
LAMC1P11047 NSD1-211ENST00000511258 809 ntTSL 3 BASIC20.49■□□□□ 0.87
LAMC1P11047 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC20.49■□□□□ 0.87
LAMC1P11047 NUDT4P2-201ENST00000578341 546 ntBASIC20.49■□□□□ 0.87
LAMC1P11047 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC20.49■□□□□ 0.87
LAMC1P11047 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
LAMC1P11047 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LAMC1P11047 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC20.49■□□□□ 0.87
LAMC1P11047 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LAMC1P11047 AL591471.1-201ENST00000621855 229 ntBASIC20.49■□□□□ 0.87
LAMC1P11047 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC20.49■□□□□ 0.87
LAMC1P11047 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LAMC1P11047 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC20.49■□□□□ 0.87
LAMC1P11047 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC20.48■□□□□ 0.87
LAMC1P11047 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
LAMC1P11047 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LAMC1P11047 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LAMC1P11047 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
LAMC1P11047 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC20.48■□□□□ 0.87
LAMC1P11047 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LAMC1P11047 FES-203ENST00000394302 2133 ntTSL 5 BASIC20.48■□□□□ 0.87
LAMC1P11047 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LAMC1P11047 LAP3P2-201ENST00000454686 1454 ntBASIC20.48■□□□□ 0.87
LAMC1P11047 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LAMC1P11047 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LAMC1P11047 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LAMC1P11047 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC20.48■□□□□ 0.87
LAMC1P11047 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LAMC1P11047 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC20.48■□□□□ 0.87
LAMC1P11047 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC20.48■□□□□ 0.87
LAMC1P11047 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC20.48■□□□□ 0.87
LAMC1P11047 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LAMC1P11047 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
LAMC1P11047 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC20.48■□□□□ 0.87
LAMC1P11047 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC20.48■□□□□ 0.87
LAMC1P11047 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LAMC1P11047 AC073869.2-201ENST00000417338 1026 ntBASIC20.48■□□□□ 0.87
LAMC1P11047 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LAMC1P11047 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LAMC1P11047 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC20.48■□□□□ 0.87
LAMC1P11047 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC20.48■□□□□ 0.87
LAMC1P11047 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LAMC1P11047 AL118516.1-201ENST00000564152 670 ntBASIC20.48■□□□□ 0.87
LAMC1P11047 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC20.48■□□□□ 0.87
LAMC1P11047 MIR5196-201ENST00000578146 115 ntBASIC20.48■□□□□ 0.87
LAMC1P11047 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC20.48■□□□□ 0.87
LAMC1P11047 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
LAMC1P11047 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
LAMC1P11047 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
LAMC1P11047 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
LAMC1P11047 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC20.48■□□□□ 0.87
LAMC1P11047 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LAMC1P11047 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
LAMC1P11047 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
LAMC1P11047 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC20.47■□□□□ 0.87
LAMC1P11047 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LAMC1P11047 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LAMC1P11047 LINC01815-202ENST00000641468 1409 ntBASIC20.47■□□□□ 0.87
LAMC1P11047 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LAMC1P11047 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC20.47■□□□□ 0.87
LAMC1P11047 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC20.47■□□□□ 0.87
LAMC1P11047 OR8T1P-201ENST00000421347 918 ntBASIC20.47■□□□□ 0.87
LAMC1P11047 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC20.47■□□□□ 0.87
LAMC1P11047 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC20.47■□□□□ 0.87
LAMC1P11047 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LAMC1P11047 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
LAMC1P11047 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
LAMC1P11047 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LAMC1P11047 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC20.47■□□□□ 0.87
LAMC1P11047 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
LAMC1P11047 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
LAMC1P11047 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms