Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 CENPM-204ENST00000402420 688 ntTSL 5 BASIC13.33□□□□□ -0.28
APOA1P02647 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.28
APOA1P02647 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOA1P02647 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.33□□□□□ -0.28
APOA1P02647 AC108751.1-201ENST00000490852 363 ntBASIC13.33□□□□□ -0.28
APOA1P02647 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC13.33□□□□□ -0.28
APOA1P02647 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC13.33□□□□□ -0.28
APOA1P02647 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APOA1P02647 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
APOA1P02647 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.33□□□□□ -0.28
APOA1P02647 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC13.33□□□□□ -0.28
APOA1P02647 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC13.33□□□□□ -0.28
APOA1P02647 AC007064.4-201ENST00000637740 555 ntBASIC13.33□□□□□ -0.28
APOA1P02647 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
APOA1P02647 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOA1P02647 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOA1P02647 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOA1P02647 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.33□□□□□ -0.28
APOA1P02647 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOA1P02647 DMBT1-201ENST00000330163 5802 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APOA1P02647 DMBT1-206ENST00000368956 5802 ntTSL 5 BASIC13.33□□□□□ -0.28
APOA1P02647 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOA1P02647 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APOA1P02647 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC13.33□□□□□ -0.28
APOA1P02647 GMEB2-201ENST00000266068 4559 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
APOA1P02647 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.33□□□□□ -0.28
APOA1P02647 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOA1P02647 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APOA1P02647 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
APOA1P02647 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APOA1P02647 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOA1P02647 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOA1P02647 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOA1P02647 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
APOA1P02647 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.32□□□□□ -0.28
APOA1P02647 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOA1P02647 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
APOA1P02647 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
APOA1P02647 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC13.32□□□□□ -0.28
APOA1P02647 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
APOA1P02647 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
APOA1P02647 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
APOA1P02647 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
APOA1P02647 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC13.32□□□□□ -0.28
APOA1P02647 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOA1P02647 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.32□□□□□ -0.28
APOA1P02647 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOA1P02647 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.32□□□□□ -0.28
APOA1P02647 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.32□□□□□ -0.28
APOA1P02647 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOA1P02647 MYO9B-206ENST00000595618 7623 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
APOA1P02647 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOA1P02647 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC13.32□□□□□ -0.28
APOA1P02647 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.32□□□□□ -0.28
APOA1P02647 RNA5SP410-201ENST00000516285 106 ntBASIC13.32□□□□□ -0.28
APOA1P02647 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.32□□□□□ -0.28
APOA1P02647 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC13.32□□□□□ -0.28
APOA1P02647 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
APOA1P02647 AC012640.2-201ENST00000561606 901 ntBASIC13.32□□□□□ -0.28
APOA1P02647 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC13.32□□□□□ -0.28
APOA1P02647 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOA1P02647 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC13.32□□□□□ -0.28
APOA1P02647 TCAP-202ENST00000578283 583 ntTSL 5 BASIC13.32□□□□□ -0.28
APOA1P02647 AC023141.13-201ENST00000604991 943 ntBASIC13.32□□□□□ -0.28
APOA1P02647 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC13.32□□□□□ -0.28
APOA1P02647 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.32□□□□□ -0.28
APOA1P02647 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC13.32□□□□□ -0.28
APOA1P02647 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
APOA1P02647 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOA1P02647 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOA1P02647 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOA1P02647 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.32□□□□□ -0.28
APOA1P02647 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
APOA1P02647 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
APOA1P02647 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.32□□□□□ -0.28
APOA1P02647 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOA1P02647 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
APOA1P02647 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
APOA1P02647 AKAP13-202ENST00000394510 9128 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
APOA1P02647 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOA1P02647 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
APOA1P02647 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.32□□□□□ -0.28
APOA1P02647 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.31□□□□□ -0.28
APOA1P02647 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC13.31□□□□□ -0.28
APOA1P02647 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOA1P02647 REXO1L4P-201ENST00000605109 1937 ntBASIC13.31□□□□□ -0.28
APOA1P02647 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOA1P02647 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.31□□□□□ -0.28
APOA1P02647 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
APOA1P02647 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOA1P02647 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC13.31□□□□□ -0.28
APOA1P02647 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
APOA1P02647 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOA1P02647 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOA1P02647 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.31□□□□□ -0.28
APOA1P02647 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
APOA1P02647 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOA1P02647 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.31□□□□□ -0.28
APOA1P02647 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
APOA1P02647 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms