Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DRAP01903 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DRAP01903 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.97■□□□□ 0.15
HLA-DRAP01903 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.97■□□□□ 0.15
HLA-DRAP01903 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DRAP01903 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.97■□□□□ 0.15
HLA-DRAP01903 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.97■□□□□ 0.15
HLA-DRAP01903 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DRAP01903 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DRAP01903 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DRAP01903 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DRAP01903 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.96■□□□□ 0.15
HLA-DRAP01903 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
HLA-DRAP01903 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DRAP01903 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DRAP01903 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DRAP01903 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.96■□□□□ 0.15
HLA-DRAP01903 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DRAP01903 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.96■□□□□ 0.15
HLA-DRAP01903 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DRAP01903 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DRAP01903 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DRAP01903 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DRAP01903 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
HLA-DRAP01903 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DRAP01903 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DRAP01903 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DRAP01903 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.96■□□□□ 0.15
HLA-DRAP01903 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
HLA-DRAP01903 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.96■□□□□ 0.15
HLA-DRAP01903 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DRAP01903 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DRAP01903 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.96■□□□□ 0.15
HLA-DRAP01903 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.96■□□□□ 0.15
HLA-DRAP01903 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.96■□□□□ 0.15
HLA-DRAP01903 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DRAP01903 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
HLA-DRAP01903 AC015688.4-201ENST00000580780 1647 ntBASIC15.96■□□□□ 0.15
HLA-DRAP01903 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
HLA-DRAP01903 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.96■□□□□ 0.15
HLA-DRAP01903 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.96■□□□□ 0.15
HLA-DRAP01903 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DRAP01903 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
HLA-DRAP01903 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DRAP01903 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
HLA-DRAP01903 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
HLA-DRAP01903 AC007191.1-201ENST00000623179 2995 ntBASIC15.96■□□□□ 0.14
HLA-DRAP01903 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
HLA-DRAP01903 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
HLA-DRAP01903 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DRAP01903 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DRAP01903 AC015802.1-201ENST00000588104 1449 ntBASIC15.95■□□□□ 0.14
HLA-DRAP01903 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
HLA-DRAP01903 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
HLA-DRAP01903 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DRAP01903 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DRAP01903 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DRAP01903 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.95■□□□□ 0.14
HLA-DRAP01903 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
HLA-DRAP01903 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
HLA-DRAP01903 AL355994.2-201ENST00000447882 704 ntBASIC15.95■□□□□ 0.14
HLA-DRAP01903 HIST2H2BB-201ENST00000449108 381 ntBASIC15.95■□□□□ 0.14
HLA-DRAP01903 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.95■□□□□ 0.14
HLA-DRAP01903 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.95■□□□□ 0.14
HLA-DRAP01903 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.95■□□□□ 0.14
HLA-DRAP01903 AC103988.2-201ENST00000561804 725 ntBASIC15.95■□□□□ 0.14
HLA-DRAP01903 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.95■□□□□ 0.14
HLA-DRAP01903 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.95■□□□□ 0.14
HLA-DRAP01903 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
HLA-DRAP01903 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DRAP01903 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DRAP01903 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.95■□□□□ 0.14
HLA-DRAP01903 BX640514.1-201ENST00000583223 1918 ntBASIC15.95■□□□□ 0.14
HLA-DRAP01903 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.95■□□□□ 0.14
HLA-DRAP01903 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.95■□□□□ 0.14
HLA-DRAP01903 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DRAP01903 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DRAP01903 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.95■□□□□ 0.14
HLA-DRAP01903 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DRAP01903 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.95■□□□□ 0.14
HLA-DRAP01903 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DRAP01903 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DRAP01903 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.95■□□□□ 0.14
HLA-DRAP01903 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
HLA-DRAP01903 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.95■□□□□ 0.14
HLA-DRAP01903 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DRAP01903 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DRAP01903 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
HLA-DRAP01903 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
HLA-DRAP01903 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DRAP01903 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.94■□□□□ 0.14
HLA-DRAP01903 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
HLA-DRAP01903 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DRAP01903 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DRAP01903 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DRAP01903 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DRAP01903 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DRAP01903 AC006504.5-208ENST00000588784 2401 ntBASIC15.94■□□□□ 0.14
HLA-DRAP01903 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DRAP01903 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms