Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
PDCD6O75340 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC12.6□□□□□ -0.39
PDCD6O75340 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC12.6□□□□□ -0.39
PDCD6O75340 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC12.6□□□□□ -0.39
PDCD6O75340 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.6□□□□□ -0.39
PDCD6O75340 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PDCD6O75340 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PDCD6O75340 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
PDCD6O75340 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PDCD6O75340 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PDCD6O75340 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PDCD6O75340 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.6□□□□□ -0.39
PDCD6O75340 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PDCD6O75340 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
PDCD6O75340 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
PDCD6O75340 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.6□□□□□ -0.39
PDCD6O75340 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
PDCD6O75340 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PDCD6O75340 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PDCD6O75340 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.6□□□□□ -0.39
PDCD6O75340 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PDCD6O75340 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PDCD6O75340 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
PDCD6O75340 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
PDCD6O75340 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PDCD6O75340 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
PDCD6O75340 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PDCD6O75340 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
PDCD6O75340 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PDCD6O75340 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC12.6□□□□□ -0.39
PDCD6O75340 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PDCD6O75340 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PDCD6O75340 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
PDCD6O75340 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
PDCD6O75340 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
PDCD6O75340 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.59□□□□□ -0.39
PDCD6O75340 MYADML-201ENST00000474610 2147 ntBASIC12.59□□□□□ -0.39
PDCD6O75340 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.59□□□□□ -0.39
PDCD6O75340 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
PDCD6O75340 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PDCD6O75340 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PDCD6O75340 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
PDCD6O75340 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
PDCD6O75340 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
PDCD6O75340 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PDCD6O75340 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PDCD6O75340 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
PDCD6O75340 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PDCD6O75340 LRRC59-203ENST00000576448 1531 ntBASIC12.59□□□□□ -0.39
PDCD6O75340 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PDCD6O75340 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PDCD6O75340 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
PDCD6O75340 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
PDCD6O75340 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
PDCD6O75340 LBH-203ENST00000404397 543 ntTSL 4 BASIC12.59□□□□□ -0.39
PDCD6O75340 KLF2P2-201ENST00000416807 1039 ntBASIC12.59□□□□□ -0.39
PDCD6O75340 SOCS2P1-201ENST00000417727 557 ntBASIC12.59□□□□□ -0.39
PDCD6O75340 BASP1P1-201ENST00000430708 665 ntBASIC12.59□□□□□ -0.39
PDCD6O75340 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.59□□□□□ -0.39
PDCD6O75340 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC12.59□□□□□ -0.39
PDCD6O75340 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC12.59□□□□□ -0.39
PDCD6O75340 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
PDCD6O75340 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
PDCD6O75340 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC12.59□□□□□ -0.39
PDCD6O75340 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC12.59□□□□□ -0.39
PDCD6O75340 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
PDCD6O75340 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC12.59□□□□□ -0.39
PDCD6O75340 AC099568.2-201ENST00000609194 695 ntBASIC12.59□□□□□ -0.39
PDCD6O75340 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC12.59□□□□□ -0.39
PDCD6O75340 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC12.59□□□□□ -0.39
PDCD6O75340 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC12.59□□□□□ -0.39
PDCD6O75340 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.59□□□□□ -0.39
PDCD6O75340 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PDCD6O75340 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
PDCD6O75340 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PDCD6O75340 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC12.59□□□□□ -0.39
PDCD6O75340 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
PDCD6O75340 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
PDCD6O75340 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
PDCD6O75340 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
PDCD6O75340 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.59□□□□□ -0.39
PDCD6O75340 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
PDCD6O75340 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PDCD6O75340 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
PDCD6O75340 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PDCD6O75340 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PDCD6O75340 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.59□□□□□ -0.39
PDCD6O75340 AC003102.2-201ENST00000589195 1469 ntBASIC12.59□□□□□ -0.39
PDCD6O75340 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC12.58□□□□□ -0.39
PDCD6O75340 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
PDCD6O75340 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
PDCD6O75340 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
PDCD6O75340 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
PDCD6O75340 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PDCD6O75340 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
PDCD6O75340 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PDCD6O75340 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
PDCD6O75340 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PDCD6O75340 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
PDCD6O75340 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms