Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CLOCKO15516 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLOCKO15516 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLOCKO15516 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLOCKO15516 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CLOCKO15516 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLOCKO15516 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLOCKO15516 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CLOCKO15516 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLOCKO15516 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.23□□□□□ -0.13
CLOCKO15516 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLOCKO15516 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLOCKO15516 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLOCKO15516 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.23□□□□□ -0.13
CLOCKO15516 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLOCKO15516 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CLOCKO15516 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.23□□□□□ -0.13
CLOCKO15516 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CLOCKO15516 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.23□□□□□ -0.13
CLOCKO15516 AC236430.1-201ENST00000402231 743 ntBASIC14.23□□□□□ -0.13
CLOCKO15516 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CLOCKO15516 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLOCKO15516 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
CLOCKO15516 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.23□□□□□ -0.13
CLOCKO15516 TSPY16P-201ENST00000449843 468 ntBASIC14.23□□□□□ -0.13
CLOCKO15516 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.23□□□□□ -0.13
CLOCKO15516 COX20P2-201ENST00000452636 358 ntBASIC14.23□□□□□ -0.13
CLOCKO15516 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLOCKO15516 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.23□□□□□ -0.13
CLOCKO15516 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLOCKO15516 AC097493.3-201ENST00000509725 367 ntBASIC14.23□□□□□ -0.13
CLOCKO15516 AC022447.6-201ENST00000515522 438 ntBASIC14.23□□□□□ -0.13
CLOCKO15516 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.23□□□□□ -0.13
CLOCKO15516 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.23□□□□□ -0.13
CLOCKO15516 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.23□□□□□ -0.13
CLOCKO15516 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLOCKO15516 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CLOCKO15516 AL139385.1-201ENST00000611744 3272 ntBASIC14.23□□□□□ -0.13
CLOCKO15516 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC14.23□□□□□ -0.13
CLOCKO15516 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLOCKO15516 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLOCKO15516 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLOCKO15516 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.23□□□□□ -0.13
CLOCKO15516 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLOCKO15516 AL023775.1-201ENST00000454907 1746 ntBASIC14.23□□□□□ -0.13
CLOCKO15516 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CLOCKO15516 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLOCKO15516 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLOCKO15516 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLOCKO15516 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.23□□□□□ -0.13
CLOCKO15516 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC14.23□□□□□ -0.13
CLOCKO15516 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CLOCKO15516 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLOCKO15516 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.23□□□□□ -0.13
CLOCKO15516 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLOCKO15516 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.23□□□□□ -0.13
CLOCKO15516 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
CLOCKO15516 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLOCKO15516 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLOCKO15516 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLOCKO15516 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLOCKO15516 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLOCKO15516 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CLOCKO15516 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.22□□□□□ -0.13
CLOCKO15516 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
CLOCKO15516 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CLOCKO15516 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLOCKO15516 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLOCKO15516 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLOCKO15516 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLOCKO15516 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLOCKO15516 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLOCKO15516 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLOCKO15516 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.22□□□□□ -0.13
CLOCKO15516 AL354702.1-201ENST00000442006 1960 ntBASIC14.22□□□□□ -0.13
CLOCKO15516 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLOCKO15516 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CLOCKO15516 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.22□□□□□ -0.13
CLOCKO15516 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLOCKO15516 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.22□□□□□ -0.13
CLOCKO15516 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC14.22□□□□□ -0.13
CLOCKO15516 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLOCKO15516 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLOCKO15516 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLOCKO15516 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.22□□□□□ -0.13
CLOCKO15516 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLOCKO15516 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CLOCKO15516 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.22□□□□□ -0.13
CLOCKO15516 AL133267.1-201ENST00000398220 340 ntBASIC14.22□□□□□ -0.13
CLOCKO15516 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.22□□□□□ -0.13
CLOCKO15516 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
CLOCKO15516 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.22□□□□□ -0.13
CLOCKO15516 TERF1P3-201ENST00000505638 1227 ntBASIC14.22□□□□□ -0.13
CLOCKO15516 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.22□□□□□ -0.13
CLOCKO15516 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.22□□□□□ -0.13
CLOCKO15516 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLOCKO15516 BANF1P1-201ENST00000553684 263 ntBASIC14.22□□□□□ -0.13
CLOCKO15516 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.22□□□□□ -0.13
CLOCKO15516 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.22□□□□□ -0.13
CLOCKO15516 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms