Protein–RNA interactions for Protein: Q9Y5U5

TNFRSF18, Tumor necrosis factor receptor superfamily member 18, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF18Q9Y5U5 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
TNFRSF18Q9Y5U5 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TNFRSF18Q9Y5U5 COL6A4P2-202ENST00000504443 2753 ntBASIC10.98□□□□□ -0.65
TNFRSF18Q9Y5U5 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC10.98□□□□□ -0.65
TNFRSF18Q9Y5U5 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
TNFRSF18Q9Y5U5 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TNFRSF18Q9Y5U5 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
TNFRSF18Q9Y5U5 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
TNFRSF18Q9Y5U5 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TNFRSF18Q9Y5U5 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 CA14-201ENST00000369111 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 SPDYE17-201ENST00000412399 783 ntBASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 BASP1P1-201ENST00000430708 665 ntBASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 TARDBPP1-201ENST00000442013 1203 ntBASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 AL512638.1-201ENST00000457493 794 ntBASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 SLED1-202ENST00000512051 380 ntBASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 MIR4745-201ENST00000577608 62 ntBASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 AC117489.1-201ENST00000625169 3217 ntBASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TNFRSF18Q9Y5U5 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TNFRSF18Q9Y5U5 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TNFRSF18Q9Y5U5 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TNFRSF18Q9Y5U5 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TNFRSF18Q9Y5U5 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
TNFRSF18Q9Y5U5 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
TNFRSF18Q9Y5U5 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC10.96□□□□□ -0.65
TNFRSF18Q9Y5U5 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC10.96□□□□□ -0.65
TNFRSF18Q9Y5U5 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TNFRSF18Q9Y5U5 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TNFRSF18Q9Y5U5 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.65
TNFRSF18Q9Y5U5 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC10.96□□□□□ -0.65
TNFRSF18Q9Y5U5 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TNFRSF18Q9Y5U5 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TNFRSF18Q9Y5U5 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
TNFRSF18Q9Y5U5 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC10.96□□□□□ -0.65
TNFRSF18Q9Y5U5 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.65
TNFRSF18Q9Y5U5 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC10.96□□□□□ -0.65
TNFRSF18Q9Y5U5 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TNFRSF18Q9Y5U5 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.65
TNFRSF18Q9Y5U5 TK1-203ENST00000588734 1681 ntTSL 2 BASIC10.96□□□□□ -0.65
TNFRSF18Q9Y5U5 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TNFRSF18Q9Y5U5 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC10.96□□□□□ -0.65
TNFRSF18Q9Y5U5 MPI-203ENST00000535694 1523 ntTSL 2 BASIC10.96□□□□□ -0.65
TNFRSF18Q9Y5U5 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC10.96□□□□□ -0.65
TNFRSF18Q9Y5U5 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
TNFRSF18Q9Y5U5 KRT8P12-202ENST00000472924 1397 ntBASIC10.96□□□□□ -0.65
TNFRSF18Q9Y5U5 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TNFRSF18Q9Y5U5 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC10.96□□□□□ -0.65
TNFRSF18Q9Y5U5 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms