Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDC42BPBQ9Y5S2 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDC42BPBQ9Y5S2 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDC42BPBQ9Y5S2 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDC42BPBQ9Y5S2 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC21.7■■□□□ 1.06
CDC42BPBQ9Y5S2 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
CDC42BPBQ9Y5S2 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CDC42BPBQ9Y5S2 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
CDC42BPBQ9Y5S2 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC21.69■■□□□ 1.06
CDC42BPBQ9Y5S2 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC21.69■■□□□ 1.06
CDC42BPBQ9Y5S2 AC013268.4-201ENST00000637413 2228 ntBASIC21.69■■□□□ 1.06
CDC42BPBQ9Y5S2 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDC42BPBQ9Y5S2 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CDC42BPBQ9Y5S2 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC21.69■■□□□ 1.06
CDC42BPBQ9Y5S2 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC21.69■■□□□ 1.06
CDC42BPBQ9Y5S2 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC21.69■■□□□ 1.06
CDC42BPBQ9Y5S2 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDC42BPBQ9Y5S2 AC145285.5-201ENST00000562217 361 ntBASIC21.69■■□□□ 1.06
CDC42BPBQ9Y5S2 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC21.69■■□□□ 1.06
CDC42BPBQ9Y5S2 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC21.69■■□□□ 1.06
CDC42BPBQ9Y5S2 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC21.69■■□□□ 1.06
CDC42BPBQ9Y5S2 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDC42BPBQ9Y5S2 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDC42BPBQ9Y5S2 SARS-202ENST00000369923 1882 ntTSL 5 BASIC21.69■■□□□ 1.06
CDC42BPBQ9Y5S2 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDC42BPBQ9Y5S2 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDC42BPBQ9Y5S2 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDC42BPBQ9Y5S2 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDC42BPBQ9Y5S2 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDC42BPBQ9Y5S2 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDC42BPBQ9Y5S2 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDC42BPBQ9Y5S2 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
CDC42BPBQ9Y5S2 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDC42BPBQ9Y5S2 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
CDC42BPBQ9Y5S2 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDC42BPBQ9Y5S2 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
CDC42BPBQ9Y5S2 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDC42BPBQ9Y5S2 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CDC42BPBQ9Y5S2 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC21.69■■□□□ 1.06
CDC42BPBQ9Y5S2 BPIFB5P-201ENST00000457066 1099 ntBASIC21.69■■□□□ 1.06
CDC42BPBQ9Y5S2 HINT1-205ENST00000508488 703 ntTSL 2 BASIC21.69■■□□□ 1.06
CDC42BPBQ9Y5S2 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDC42BPBQ9Y5S2 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDC42BPBQ9Y5S2 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDC42BPBQ9Y5S2 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDC42BPBQ9Y5S2 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
CDC42BPBQ9Y5S2 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CDC42BPBQ9Y5S2 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CDC42BPBQ9Y5S2 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDC42BPBQ9Y5S2 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CDC42BPBQ9Y5S2 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC21.68■■□□□ 1.06
CDC42BPBQ9Y5S2 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CDC42BPBQ9Y5S2 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDC42BPBQ9Y5S2 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDC42BPBQ9Y5S2 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDC42BPBQ9Y5S2 AMT-256ENST00000638063 1783 ntTSL 5 BASIC21.68■■□□□ 1.06
CDC42BPBQ9Y5S2 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDC42BPBQ9Y5S2 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDC42BPBQ9Y5S2 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDC42BPBQ9Y5S2 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDC42BPBQ9Y5S2 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC21.68■■□□□ 1.06
CDC42BPBQ9Y5S2 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC21.68■■□□□ 1.06
CDC42BPBQ9Y5S2 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC21.68■■□□□ 1.06
CDC42BPBQ9Y5S2 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDC42BPBQ9Y5S2 PFN2-212ENST00000490975 858 ntTSL 4 BASIC21.68■■□□□ 1.06
CDC42BPBQ9Y5S2 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC21.68■■□□□ 1.06
CDC42BPBQ9Y5S2 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC21.68■■□□□ 1.06
CDC42BPBQ9Y5S2 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC21.68■■□□□ 1.06
CDC42BPBQ9Y5S2 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC21.68■■□□□ 1.06
CDC42BPBQ9Y5S2 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CDC42BPBQ9Y5S2 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDC42BPBQ9Y5S2 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDC42BPBQ9Y5S2 AL365181.1-201ENST00000564032 1828 ntBASIC21.68■■□□□ 1.06
CDC42BPBQ9Y5S2 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDC42BPBQ9Y5S2 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
CDC42BPBQ9Y5S2 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC21.68■■□□□ 1.06
CDC42BPBQ9Y5S2 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CDC42BPBQ9Y5S2 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDC42BPBQ9Y5S2 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CDC42BPBQ9Y5S2 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDC42BPBQ9Y5S2 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CDC42BPBQ9Y5S2 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDC42BPBQ9Y5S2 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDC42BPBQ9Y5S2 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDC42BPBQ9Y5S2 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDC42BPBQ9Y5S2 AC073210.1-201ENST00000414799 232 ntBASIC21.67■■□□□ 1.06
CDC42BPBQ9Y5S2 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDC42BPBQ9Y5S2 FAM86KP-201ENST00000509817 987 ntBASIC21.67■■□□□ 1.06
CDC42BPBQ9Y5S2 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC21.67■■□□□ 1.06
CDC42BPBQ9Y5S2 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC21.67■■□□□ 1.06
CDC42BPBQ9Y5S2 AC023968.2-201ENST00000560593 1049 ntBASIC21.67■■□□□ 1.06
CDC42BPBQ9Y5S2 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC21.67■■□□□ 1.06
CDC42BPBQ9Y5S2 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDC42BPBQ9Y5S2 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC21.67■■□□□ 1.06
CDC42BPBQ9Y5S2 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CDC42BPBQ9Y5S2 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC21.67■■□□□ 1.06
CDC42BPBQ9Y5S2 AC008894.3-201ENST00000624324 3103 ntBASIC21.67■■□□□ 1.06
CDC42BPBQ9Y5S2 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDC42BPBQ9Y5S2 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDC42BPBQ9Y5S2 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms