Protein–RNA interactions for Protein: Q99504

EYA3, Eyes absent homolog 3, humanhuman

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EYA3Q99504 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC17.9■□□□□ 0.46
EYA3Q99504 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
EYA3Q99504 MIR4649-201ENST00000582839 64 ntBASIC17.9■□□□□ 0.46
EYA3Q99504 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC17.9■□□□□ 0.46
EYA3Q99504 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC17.9■□□□□ 0.46
EYA3Q99504 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EYA3Q99504 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.9■□□□□ 0.46
EYA3Q99504 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
EYA3Q99504 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
EYA3Q99504 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC17.9■□□□□ 0.46
EYA3Q99504 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EYA3Q99504 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
EYA3Q99504 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.9■□□□□ 0.46
EYA3Q99504 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
EYA3Q99504 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.9■□□□□ 0.46
EYA3Q99504 NFIC-211ENST00000641145 8399 ntBASIC17.9■□□□□ 0.46
EYA3Q99504 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EYA3Q99504 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
EYA3Q99504 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.46
EYA3Q99504 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EYA3Q99504 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
EYA3Q99504 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.89■□□□□ 0.45
EYA3Q99504 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
EYA3Q99504 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.89■□□□□ 0.45
EYA3Q99504 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EYA3Q99504 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.89■□□□□ 0.45
EYA3Q99504 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
EYA3Q99504 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC17.89■□□□□ 0.45
EYA3Q99504 BUD31-205ENST00000456893 512 ntTSL 5 BASIC17.89■□□□□ 0.45
EYA3Q99504 AC114947.1-202ENST00000514136 344 ntBASIC17.89■□□□□ 0.45
EYA3Q99504 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
EYA3Q99504 AC007326.1-201ENST00000604539 458 ntBASIC17.89■□□□□ 0.45
EYA3Q99504 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
EYA3Q99504 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
EYA3Q99504 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.89■□□□□ 0.45
EYA3Q99504 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC17.89■□□□□ 0.45
EYA3Q99504 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.89■□□□□ 0.45
EYA3Q99504 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC17.89■□□□□ 0.45
EYA3Q99504 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
EYA3Q99504 KRT8P31-201ENST00000504812 1408 ntBASIC17.89■□□□□ 0.45
EYA3Q99504 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
EYA3Q99504 AC009093.10-201ENST00000641956 1442 ntBASIC17.89■□□□□ 0.45
EYA3Q99504 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.89■□□□□ 0.45
EYA3Q99504 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
EYA3Q99504 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
EYA3Q99504 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EYA3Q99504 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
EYA3Q99504 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
EYA3Q99504 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC17.88■□□□□ 0.45
EYA3Q99504 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
EYA3Q99504 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.88■□□□□ 0.45
EYA3Q99504 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EYA3Q99504 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC17.88■□□□□ 0.45
EYA3Q99504 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
EYA3Q99504 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EYA3Q99504 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EYA3Q99504 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EYA3Q99504 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
EYA3Q99504 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
EYA3Q99504 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC17.88■□□□□ 0.45
EYA3Q99504 AC003686.1-201ENST00000550956 1034 ntBASIC17.88■□□□□ 0.45
EYA3Q99504 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC17.88■□□□□ 0.45
EYA3Q99504 MIR4522-201ENST00000584932 87 ntBASIC17.88■□□□□ 0.45
EYA3Q99504 GMFG-209ENST00000600322 622 ntTSL 5 BASIC17.88■□□□□ 0.45
EYA3Q99504 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
EYA3Q99504 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EYA3Q99504 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
EYA3Q99504 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
EYA3Q99504 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC17.88■□□□□ 0.45
EYA3Q99504 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EYA3Q99504 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
EYA3Q99504 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
EYA3Q99504 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EYA3Q99504 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
EYA3Q99504 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EYA3Q99504 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC17.88■□□□□ 0.45
EYA3Q99504 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC17.88■□□□□ 0.45
EYA3Q99504 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EYA3Q99504 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC17.88■□□□□ 0.45
EYA3Q99504 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
EYA3Q99504 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
EYA3Q99504 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
EYA3Q99504 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
EYA3Q99504 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
EYA3Q99504 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.87■□□□□ 0.45
EYA3Q99504 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
EYA3Q99504 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
EYA3Q99504 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
EYA3Q99504 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
EYA3Q99504 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
EYA3Q99504 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
EYA3Q99504 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC17.87■□□□□ 0.45
EYA3Q99504 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC17.87■□□□□ 0.45
EYA3Q99504 NDUFS6P1-201ENST00000485187 316 ntBASIC17.87■□□□□ 0.45
EYA3Q99504 RHEB-207ENST00000496004 744 ntTSL 2 BASIC17.87■□□□□ 0.45
EYA3Q99504 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC17.87■□□□□ 0.45
EYA3Q99504 RPL17P45-201ENST00000586289 509 ntBASIC17.87■□□□□ 0.45
EYA3Q99504 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC17.87■□□□□ 0.45
EYA3Q99504 AC009084.3-201ENST00000623356 437 ntBASIC17.87■□□□□ 0.45
EYA3Q99504 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms