Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
UBR1Q8IWV7 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC20.36■□□□□ 0.85
UBR1Q8IWV7 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBR1Q8IWV7 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC20.36■□□□□ 0.85
UBR1Q8IWV7 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
UBR1Q8IWV7 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
UBR1Q8IWV7 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
UBR1Q8IWV7 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBR1Q8IWV7 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBR1Q8IWV7 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBR1Q8IWV7 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBR1Q8IWV7 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
UBR1Q8IWV7 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBR1Q8IWV7 AP000244.1-201ENST00000424582 201 ntBASIC20.36■□□□□ 0.85
UBR1Q8IWV7 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC20.36■□□□□ 0.85
UBR1Q8IWV7 GALP-202ENST00000440823 889 ntTSL 5 BASIC20.36■□□□□ 0.85
UBR1Q8IWV7 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC20.36■□□□□ 0.85
UBR1Q8IWV7 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC20.36■□□□□ 0.85
UBR1Q8IWV7 LINC00115-201ENST00000473798 1317 ntBASIC20.36■□□□□ 0.85
UBR1Q8IWV7 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
UBR1Q8IWV7 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC20.36■□□□□ 0.85
UBR1Q8IWV7 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
UBR1Q8IWV7 MIR4265-201ENST00000582152 99 ntBASIC20.36■□□□□ 0.85
UBR1Q8IWV7 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC20.36■□□□□ 0.85
UBR1Q8IWV7 AC126755.5-201ENST00000622756 267 ntBASIC20.36■□□□□ 0.85
UBR1Q8IWV7 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
UBR1Q8IWV7 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC20.36■□□□□ 0.85
UBR1Q8IWV7 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC20.36■□□□□ 0.85
UBR1Q8IWV7 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UBR1Q8IWV7 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
UBR1Q8IWV7 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
UBR1Q8IWV7 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBR1Q8IWV7 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
UBR1Q8IWV7 GOLGA8UP-201ENST00000527159 1755 ntBASIC20.35■□□□□ 0.85
UBR1Q8IWV7 AMT-256ENST00000638063 1783 ntTSL 5 BASIC20.35■□□□□ 0.85
UBR1Q8IWV7 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UBR1Q8IWV7 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBR1Q8IWV7 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBR1Q8IWV7 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC20.35■□□□□ 0.85
UBR1Q8IWV7 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBR1Q8IWV7 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UBR1Q8IWV7 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC20.35■□□□□ 0.85
UBR1Q8IWV7 AC093300.1-201ENST00000510368 1201 ntBASIC20.35■□□□□ 0.85
UBR1Q8IWV7 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBR1Q8IWV7 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
UBR1Q8IWV7 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBR1Q8IWV7 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBR1Q8IWV7 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UBR1Q8IWV7 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC20.35■□□□□ 0.85
UBR1Q8IWV7 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBR1Q8IWV7 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
UBR1Q8IWV7 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBR1Q8IWV7 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBR1Q8IWV7 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
UBR1Q8IWV7 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC20.34■□□□□ 0.85
UBR1Q8IWV7 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
UBR1Q8IWV7 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
UBR1Q8IWV7 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
UBR1Q8IWV7 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC20.34■□□□□ 0.85
UBR1Q8IWV7 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC20.34■□□□□ 0.85
UBR1Q8IWV7 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC20.34■□□□□ 0.85
UBR1Q8IWV7 ABCD1P4-201ENST00000399687 604 ntBASIC20.34■□□□□ 0.85
UBR1Q8IWV7 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
UBR1Q8IWV7 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC20.34■□□□□ 0.85
UBR1Q8IWV7 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC20.34■□□□□ 0.85
UBR1Q8IWV7 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC20.34■□□□□ 0.85
UBR1Q8IWV7 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC20.34■□□□□ 0.85
UBR1Q8IWV7 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC20.34■□□□□ 0.85
UBR1Q8IWV7 BATF-202ENST00000555504 361 ntTSL 2 BASIC20.34■□□□□ 0.85
UBR1Q8IWV7 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC20.34■□□□□ 0.85
UBR1Q8IWV7 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
UBR1Q8IWV7 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
UBR1Q8IWV7 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBR1Q8IWV7 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBR1Q8IWV7 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC20.34■□□□□ 0.85
UBR1Q8IWV7 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
UBR1Q8IWV7 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
UBR1Q8IWV7 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
UBR1Q8IWV7 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
UBR1Q8IWV7 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBR1Q8IWV7 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC20.34■□□□□ 0.85
UBR1Q8IWV7 SARS-202ENST00000369923 1882 ntTSL 5 BASIC20.34■□□□□ 0.85
UBR1Q8IWV7 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
UBR1Q8IWV7 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBR1Q8IWV7 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
UBR1Q8IWV7 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBR1Q8IWV7 AC027612.2-202ENST00000445955 1199 ntBASIC20.33■□□□□ 0.85
UBR1Q8IWV7 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC20.33■□□□□ 0.85
UBR1Q8IWV7 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC20.33■□□□□ 0.85
UBR1Q8IWV7 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC20.33■□□□□ 0.85
UBR1Q8IWV7 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC20.33■□□□□ 0.85
UBR1Q8IWV7 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC20.33■□□□□ 0.85
UBR1Q8IWV7 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
UBR1Q8IWV7 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
UBR1Q8IWV7 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
UBR1Q8IWV7 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
UBR1Q8IWV7 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBR1Q8IWV7 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBR1Q8IWV7 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBR1Q8IWV7 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms