Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
TRIM50Q86XT4 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM50Q86XT4 AC136759.1-202ENST00000530858 2194 ntBASIC16.55■□□□□ 0.24
TRIM50Q86XT4 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TRIM50Q86XT4 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM50Q86XT4 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
TRIM50Q86XT4 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM50Q86XT4 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.55■□□□□ 0.24
TRIM50Q86XT4 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM50Q86XT4 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM50Q86XT4 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM50Q86XT4 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC16.55■□□□□ 0.24
TRIM50Q86XT4 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM50Q86XT4 AL008718.2-201ENST00000609206 1313 ntBASIC16.55■□□□□ 0.24
TRIM50Q86XT4 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.55■□□□□ 0.24
TRIM50Q86XT4 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM50Q86XT4 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TRIM50Q86XT4 AC091046.1-201ENST00000331871 207 ntBASIC16.55■□□□□ 0.24
TRIM50Q86XT4 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM50Q86XT4 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM50Q86XT4 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
TRIM50Q86XT4 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC16.55■□□□□ 0.24
TRIM50Q86XT4 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC16.55■□□□□ 0.24
TRIM50Q86XT4 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC16.55■□□□□ 0.24
TRIM50Q86XT4 CICP12-201ENST00000455801 843 ntBASIC16.55■□□□□ 0.24
TRIM50Q86XT4 AC245884.6-201ENST00000515672 1067 ntBASIC16.55■□□□□ 0.24
TRIM50Q86XT4 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC16.55■□□□□ 0.24
TRIM50Q86XT4 AC024681.1-201ENST00000521917 487 ntBASIC16.55■□□□□ 0.24
TRIM50Q86XT4 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC16.55■□□□□ 0.24
TRIM50Q86XT4 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC16.55■□□□□ 0.24
TRIM50Q86XT4 SYT17-208ENST00000568433 812 ntTSL 3 BASIC16.55■□□□□ 0.24
TRIM50Q86XT4 RN7SL574P-201ENST00000581512 297 ntBASIC16.55■□□□□ 0.24
TRIM50Q86XT4 Z98259.2-201ENST00000641583 609 ntBASIC16.55■□□□□ 0.24
TRIM50Q86XT4 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM50Q86XT4 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.55■□□□□ 0.24
TRIM50Q86XT4 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM50Q86XT4 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
TRIM50Q86XT4 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
TRIM50Q86XT4 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM50Q86XT4 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM50Q86XT4 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TRIM50Q86XT4 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM50Q86XT4 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM50Q86XT4 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
TRIM50Q86XT4 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.55■□□□□ 0.24
TRIM50Q86XT4 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM50Q86XT4 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM50Q86XT4 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM50Q86XT4 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM50Q86XT4 AL161772.1-201ENST00000610494 4412 ntBASIC16.54■□□□□ 0.24
TRIM50Q86XT4 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC16.54■□□□□ 0.24
TRIM50Q86XT4 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC16.54■□□□□ 0.24
TRIM50Q86XT4 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC16.54■□□□□ 0.24
TRIM50Q86XT4 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
TRIM50Q86XT4 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.54■□□□□ 0.24
TRIM50Q86XT4 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM50Q86XT4 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM50Q86XT4 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM50Q86XT4 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC16.54■□□□□ 0.24
TRIM50Q86XT4 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.54■□□□□ 0.24
TRIM50Q86XT4 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM50Q86XT4 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM50Q86XT4 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
TRIM50Q86XT4 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM50Q86XT4 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM50Q86XT4 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM50Q86XT4 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM50Q86XT4 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM50Q86XT4 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC16.54■□□□□ 0.24
TRIM50Q86XT4 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC16.54■□□□□ 0.24
TRIM50Q86XT4 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC16.54■□□□□ 0.24
TRIM50Q86XT4 AC125604.1-201ENST00000496255 707 ntBASIC16.54■□□□□ 0.24
TRIM50Q86XT4 SCARNA21-201ENST00000517026 139 ntBASIC16.54■□□□□ 0.24
TRIM50Q86XT4 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM50Q86XT4 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC16.54■□□□□ 0.24
TRIM50Q86XT4 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC16.54■□□□□ 0.24
TRIM50Q86XT4 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC16.54■□□□□ 0.24
TRIM50Q86XT4 RERG-205ENST00000537647 935 ntTSL 2 BASIC16.54■□□□□ 0.24
TRIM50Q86XT4 FGFR3P5-201ENST00000564496 886 ntBASIC16.54■□□□□ 0.24
TRIM50Q86XT4 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC16.54■□□□□ 0.24
TRIM50Q86XT4 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC16.54■□□□□ 0.24
TRIM50Q86XT4 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.54■□□□□ 0.24
TRIM50Q86XT4 MIR6720-201ENST00000611664 98 ntBASIC16.54■□□□□ 0.24
TRIM50Q86XT4 CU633904.3-201ENST00000624042 1029 ntBASIC16.54■□□□□ 0.24
TRIM50Q86XT4 AL805961.1-203ENST00000641078 1258 ntBASIC16.54■□□□□ 0.24
TRIM50Q86XT4 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM50Q86XT4 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
TRIM50Q86XT4 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TRIM50Q86XT4 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.54■□□□□ 0.24
TRIM50Q86XT4 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM50Q86XT4 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.54■□□□□ 0.24
TRIM50Q86XT4 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM50Q86XT4 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
TRIM50Q86XT4 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TRIM50Q86XT4 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM50Q86XT4 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM50Q86XT4 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
TRIM50Q86XT4 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM50Q86XT4 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms