Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TUBA1AQ71U36 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TUBA1AQ71U36 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TUBA1AQ71U36 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TUBA1AQ71U36 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TUBA1AQ71U36 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.86□□□□□ -0.19
TUBA1AQ71U36 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TUBA1AQ71U36 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TUBA1AQ71U36 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TUBA1AQ71U36 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TUBA1AQ71U36 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
TUBA1AQ71U36 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.86□□□□□ -0.19
TUBA1AQ71U36 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 AC074338.1-201ENST00000416825 156 ntBASIC13.85□□□□□ -0.19
TUBA1AQ71U36 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 AC002472.2-201ENST00000442739 958 ntBASIC13.85□□□□□ -0.19
TUBA1AQ71U36 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 LINC02560-201ENST00000596379 459 ntBASIC13.85□□□□□ -0.19
TUBA1AQ71U36 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.85□□□□□ -0.19
TUBA1AQ71U36 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.85□□□□□ -0.19
TUBA1AQ71U36 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.85□□□□□ -0.19
TUBA1AQ71U36 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.85□□□□□ -0.19
TUBA1AQ71U36 AF228730.6-201ENST00000641497 218 ntBASIC13.85□□□□□ -0.19
TUBA1AQ71U36 AC084121.3-201ENST00000641716 218 ntBASIC13.85□□□□□ -0.19
TUBA1AQ71U36 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 AC055811.4-201ENST00000624039 1754 ntBASIC13.85□□□□□ -0.19
TUBA1AQ71U36 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TUBA1AQ71U36 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TUBA1AQ71U36 AC015909.5-201ENST00000624336 2266 ntBASIC13.84□□□□□ -0.19
TUBA1AQ71U36 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms