Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 AC005252.3-201ENST00000623855 2258 ntBASIC15.33■□□□□ 0.04
ITGA8P53708 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ITGA8P53708 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ITGA8P53708 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
ITGA8P53708 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
ITGA8P53708 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
ITGA8P53708 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
ITGA8P53708 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ITGA8P53708 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ITGA8P53708 MAPT-IT1-201ENST00000624111 3016 ntBASIC15.33■□□□□ 0.04
ITGA8P53708 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ITGA8P53708 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ITGA8P53708 MYADML-201ENST00000474610 2147 ntBASIC15.32■□□□□ 0.04
ITGA8P53708 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
ITGA8P53708 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.32■□□□□ 0.04
ITGA8P53708 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ITGA8P53708 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ITGA8P53708 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
ITGA8P53708 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ITGA8P53708 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ITGA8P53708 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ITGA8P53708 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
ITGA8P53708 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ITGA8P53708 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.32■□□□□ 0.04
ITGA8P53708 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.32■□□□□ 0.04
ITGA8P53708 AL139094.1-201ENST00000405549 1188 ntBASIC15.32■□□□□ 0.04
ITGA8P53708 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.32■□□□□ 0.04
ITGA8P53708 AC241585.1-201ENST00000433527 519 ntBASIC15.32■□□□□ 0.04
ITGA8P53708 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.32■□□□□ 0.04
ITGA8P53708 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.32■□□□□ 0.04
ITGA8P53708 AC026434.2-201ENST00000506094 1078 ntBASIC15.32■□□□□ 0.04
ITGA8P53708 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.32■□□□□ 0.04
ITGA8P53708 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.32■□□□□ 0.04
ITGA8P53708 AC135586.1-201ENST00000539323 574 ntBASIC15.32■□□□□ 0.04
ITGA8P53708 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ITGA8P53708 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.32■□□□□ 0.04
ITGA8P53708 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.32■□□□□ 0.04
ITGA8P53708 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.32■□□□□ 0.04
ITGA8P53708 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.32■□□□□ 0.04
ITGA8P53708 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.32■□□□□ 0.04
ITGA8P53708 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.32■□□□□ 0.04
ITGA8P53708 AC008738.7-201ENST00000609744 511 ntBASIC15.32■□□□□ 0.04
ITGA8P53708 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.32■□□□□ 0.04
ITGA8P53708 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.32■□□□□ 0.04
ITGA8P53708 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ITGA8P53708 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ITGA8P53708 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC15.32■□□□□ 0.04
ITGA8P53708 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ITGA8P53708 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.32■□□□□ 0.04
ITGA8P53708 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
ITGA8P53708 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
ITGA8P53708 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
ITGA8P53708 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ITGA8P53708 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
ITGA8P53708 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC15.32■□□□□ 0.04
ITGA8P53708 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ITGA8P53708 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ITGA8P53708 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ITGA8P53708 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ITGA8P53708 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC15.32■□□□□ 0.04
ITGA8P53708 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
ITGA8P53708 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
ITGA8P53708 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.31■□□□□ 0.04
ITGA8P53708 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ITGA8P53708 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ITGA8P53708 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ITGA8P53708 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ITGA8P53708 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ITGA8P53708 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
ITGA8P53708 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.31■□□□□ 0.04
ITGA8P53708 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ITGA8P53708 APP-205ENST00000358918 2366 ntTSL 5 BASIC15.31■□□□□ 0.04
ITGA8P53708 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.31■□□□□ 0.04
ITGA8P53708 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ITGA8P53708 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ITGA8P53708 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ITGA8P53708 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.31■□□□□ 0.04
ITGA8P53708 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.31■□□□□ 0.04
ITGA8P53708 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.31■□□□□ 0.04
ITGA8P53708 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ITGA8P53708 HMGN1P19-201ENST00000436976 333 ntBASIC15.31■□□□□ 0.04
ITGA8P53708 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.31■□□□□ 0.04
ITGA8P53708 RN7SL399P-201ENST00000471648 279 ntBASIC15.31■□□□□ 0.04
ITGA8P53708 AC067863.1-201ENST00000494933 530 ntBASIC15.31■□□□□ 0.04
ITGA8P53708 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.31■□□□□ 0.04
ITGA8P53708 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.31■□□□□ 0.04
ITGA8P53708 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.31■□□□□ 0.04
ITGA8P53708 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.31■□□□□ 0.04
ITGA8P53708 AC093813.1-201ENST00000605066 256 ntBASIC15.31■□□□□ 0.04
ITGA8P53708 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.31■□□□□ 0.04
ITGA8P53708 BX539320.1-201ENST00000623759 877 ntBASIC15.31■□□□□ 0.04
ITGA8P53708 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.31■□□□□ 0.04
ITGA8P53708 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ITGA8P53708 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.31■□□□□ 0.04
ITGA8P53708 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
ITGA8P53708 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ITGA8P53708 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC15.31■□□□□ 0.04
ITGA8P53708 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ITGA8P53708 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ITGA8P53708 SRC-202ENST00000373558 4304 ntTSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms