Protein–RNA interactions for Protein: P24046

GABRR1, Gamma-aminobutyric acid receptor subunit rho-1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRR1P24046 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
GABRR1P24046 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
GABRR1P24046 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
GABRR1P24046 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
GABRR1P24046 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.35
GABRR1P24046 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
GABRR1P24046 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GABRR1P24046 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GABRR1P24046 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.89□□□□□ -0.35
GABRR1P24046 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.89□□□□□ -0.35
GABRR1P24046 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
GABRR1P24046 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GABRR1P24046 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GABRR1P24046 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
GABRR1P24046 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC12.89□□□□□ -0.35
GABRR1P24046 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
GABRR1P24046 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.89□□□□□ -0.35
GABRR1P24046 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
GABRR1P24046 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.89□□□□□ -0.35
GABRR1P24046 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
GABRR1P24046 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GABRR1P24046 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
GABRR1P24046 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GABRR1P24046 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GABRR1P24046 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GABRR1P24046 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GABRR1P24046 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.89□□□□□ -0.35
GABRR1P24046 ARL16-202ENST00000570561 768 ntTSL 2 BASIC12.89□□□□□ -0.35
GABRR1P24046 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.89□□□□□ -0.35
GABRR1P24046 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
GABRR1P24046 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
GABRR1P24046 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
GABRR1P24046 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GABRR1P24046 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GABRR1P24046 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GABRR1P24046 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.89□□□□□ -0.35
GABRR1P24046 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
GABRR1P24046 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GABRR1P24046 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GABRR1P24046 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GABRR1P24046 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GABRR1P24046 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GABRR1P24046 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
GABRR1P24046 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
GABRR1P24046 AL928921.2-201ENST00000641325 2442 ntBASIC12.89□□□□□ -0.35
GABRR1P24046 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
GABRR1P24046 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
GABRR1P24046 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
GABRR1P24046 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.89□□□□□ -0.35
GABRR1P24046 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
GABRR1P24046 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
GABRR1P24046 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.88□□□□□ -0.35
GABRR1P24046 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
GABRR1P24046 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
GABRR1P24046 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.88□□□□□ -0.35
GABRR1P24046 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
GABRR1P24046 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
GABRR1P24046 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
GABRR1P24046 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
GABRR1P24046 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
GABRR1P24046 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
GABRR1P24046 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
GABRR1P24046 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
GABRR1P24046 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
GABRR1P24046 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
GABRR1P24046 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
GABRR1P24046 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
GABRR1P24046 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
GABRR1P24046 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
GABRR1P24046 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
GABRR1P24046 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
GABRR1P24046 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
GABRR1P24046 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
GABRR1P24046 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
GABRR1P24046 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
GABRR1P24046 MRPS18AP1-201ENST00000414458 589 ntBASIC12.88□□□□□ -0.35
GABRR1P24046 MEP1AP4-201ENST00000423244 1087 ntBASIC12.88□□□□□ -0.35
GABRR1P24046 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
GABRR1P24046 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
GABRR1P24046 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC12.88□□□□□ -0.35
GABRR1P24046 FAM86LP-201ENST00000478302 853 ntBASIC12.88□□□□□ -0.35
GABRR1P24046 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
GABRR1P24046 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC12.88□□□□□ -0.35
GABRR1P24046 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
GABRR1P24046 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
GABRR1P24046 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC12.88□□□□□ -0.35
GABRR1P24046 RARRES2P5-201ENST00000564013 466 ntBASIC12.88□□□□□ -0.35
GABRR1P24046 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC12.88□□□□□ -0.35
GABRR1P24046 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
GABRR1P24046 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC12.88□□□□□ -0.35
GABRR1P24046 AC018665.1-201ENST00000622927 1362 ntBASIC12.88□□□□□ -0.35
GABRR1P24046 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
GABRR1P24046 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
GABRR1P24046 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
GABRR1P24046 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
GABRR1P24046 AC136759.1-202ENST00000530858 2194 ntBASIC12.88□□□□□ -0.35
GABRR1P24046 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
GABRR1P24046 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
GABRR1P24046 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
GABRR1P24046 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms