Protein–RNA interactions for Protein: O00507

USP9Y, Probable ubiquitin carboxyl-terminal hydrolase FAF-Y, humanhuman

Predicted RBP Predictions only

Length 2,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9YO00507 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
USP9YO00507 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.6□□□□□ -0.39
USP9YO00507 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC12.6□□□□□ -0.39
USP9YO00507 RBPMSLP-201ENST00000433427 502 ntBASIC12.6□□□□□ -0.39
USP9YO00507 AL773545.2-201ENST00000442149 472 ntBASIC12.6□□□□□ -0.39
USP9YO00507 RN7SL288P-201ENST00000490496 291 ntBASIC12.6□□□□□ -0.39
USP9YO00507 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC12.6□□□□□ -0.39
USP9YO00507 NAT9-219ENST00000582524 573 ntTSL 4 BASIC12.6□□□□□ -0.39
USP9YO00507 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC12.6□□□□□ -0.39
USP9YO00507 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC12.6□□□□□ -0.39
USP9YO00507 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC12.6□□□□□ -0.39
USP9YO00507 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
USP9YO00507 MIR6893-201ENST00000613458 69 ntBASIC12.6□□□□□ -0.39
USP9YO00507 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC12.6□□□□□ -0.39
USP9YO00507 AL357143.1-203ENST00000639750 881 ntBASIC12.6□□□□□ -0.39
USP9YO00507 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
USP9YO00507 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
USP9YO00507 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
USP9YO00507 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
USP9YO00507 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC12.6□□□□□ -0.39
USP9YO00507 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC12.6□□□□□ -0.39
USP9YO00507 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
USP9YO00507 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC12.59□□□□□ -0.39
USP9YO00507 FKBP4P8-201ENST00000610931 1369 ntBASIC12.59□□□□□ -0.39
USP9YO00507 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC12.59□□□□□ -0.39
USP9YO00507 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
USP9YO00507 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
USP9YO00507 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
USP9YO00507 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
USP9YO00507 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
USP9YO00507 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
USP9YO00507 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
USP9YO00507 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
USP9YO00507 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
USP9YO00507 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
USP9YO00507 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
USP9YO00507 JTB-202ENST00000356648 1040 ntTSL 2 BASIC12.59□□□□□ -0.39
USP9YO00507 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
USP9YO00507 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
USP9YO00507 RN7SL578P-201ENST00000477781 283 ntBASIC12.59□□□□□ -0.39
USP9YO00507 AC008026.2-201ENST00000495438 348 ntBASIC12.59□□□□□ -0.39
USP9YO00507 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC12.59□□□□□ -0.39
USP9YO00507 RPS23-207ENST00000511844 530 ntTSL 2 BASIC12.59□□□□□ -0.39
USP9YO00507 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
USP9YO00507 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC12.59□□□□□ -0.39
USP9YO00507 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC12.59□□□□□ -0.39
USP9YO00507 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC12.59□□□□□ -0.39
USP9YO00507 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
USP9YO00507 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
USP9YO00507 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
USP9YO00507 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
USP9YO00507 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
USP9YO00507 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
USP9YO00507 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
USP9YO00507 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC12.59□□□□□ -0.39
USP9YO00507 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
USP9YO00507 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
USP9YO00507 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC12.59□□□□□ -0.39
USP9YO00507 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
USP9YO00507 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
USP9YO00507 KDF1-202ENST00000616918 1651 ntTSL 2 BASIC12.59□□□□□ -0.39
USP9YO00507 MAD2L1BP-201ENST00000372171 1301 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
USP9YO00507 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC12.59□□□□□ -0.39
USP9YO00507 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
USP9YO00507 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
USP9YO00507 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
USP9YO00507 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
USP9YO00507 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
USP9YO00507 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
USP9YO00507 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC12.59□□□□□ -0.39
USP9YO00507 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
USP9YO00507 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC12.59□□□□□ -0.39
USP9YO00507 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
USP9YO00507 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC12.59□□□□□ -0.39
USP9YO00507 THYN1-203ENST00000392594 943 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
USP9YO00507 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.59□□□□□ -0.39
USP9YO00507 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC12.59□□□□□ -0.39
USP9YO00507 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.59□□□□□ -0.39
USP9YO00507 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC12.59□□□□□ -0.39
USP9YO00507 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC12.59□□□□□ -0.39
USP9YO00507 MIR4640-201ENST00000581824 90 ntBASIC12.59□□□□□ -0.39
USP9YO00507 AC138761.6-201ENST00000583997 1423 ntBASIC12.59□□□□□ -0.39
USP9YO00507 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
USP9YO00507 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
USP9YO00507 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
USP9YO00507 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.59□□□□□ -0.39
USP9YO00507 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC12.58□□□□□ -0.39
USP9YO00507 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC12.58□□□□□ -0.39
USP9YO00507 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
USP9YO00507 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.39
USP9YO00507 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC12.58□□□□□ -0.39
USP9YO00507 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC12.58□□□□□ -0.39
USP9YO00507 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.39
USP9YO00507 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.39
USP9YO00507 ZBED1P1-201ENST00000502364 1930 ntBASIC12.58□□□□□ -0.4
USP9YO00507 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
USP9YO00507 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
USP9YO00507 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
USP9YO00507 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
USP9YO00507 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms