Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
GCM1Q9NP62 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
GCM1Q9NP62 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
GCM1Q9NP62 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
GCM1Q9NP62 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
GCM1Q9NP62 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GCM1Q9NP62 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
GCM1Q9NP62 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GCM1Q9NP62 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
GCM1Q9NP62 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GCM1Q9NP62 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
GCM1Q9NP62 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
GCM1Q9NP62 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC12.8□□□□□ -0.36
GCM1Q9NP62 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GCM1Q9NP62 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GCM1Q9NP62 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
GCM1Q9NP62 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GCM1Q9NP62 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
GCM1Q9NP62 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
GCM1Q9NP62 PDIA3P1-201ENST00000471856 1510 ntBASIC12.8□□□□□ -0.36
GCM1Q9NP62 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
GCM1Q9NP62 ARSEP1-201ENST00000420443 635 ntBASIC12.8□□□□□ -0.36
GCM1Q9NP62 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC12.8□□□□□ -0.36
GCM1Q9NP62 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC12.8□□□□□ -0.36
GCM1Q9NP62 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC12.8□□□□□ -0.36
GCM1Q9NP62 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC12.8□□□□□ -0.36
GCM1Q9NP62 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
GCM1Q9NP62 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.8□□□□□ -0.36
GCM1Q9NP62 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
GCM1Q9NP62 CFL1-212ENST00000531413 636 ntTSL 3 BASIC12.8□□□□□ -0.36
GCM1Q9NP62 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
GCM1Q9NP62 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC12.8□□□□□ -0.36
GCM1Q9NP62 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC12.8□□□□□ -0.36
GCM1Q9NP62 AC244669.2-201ENST00000612320 853 ntBASIC12.8□□□□□ -0.36
GCM1Q9NP62 LARP4-220ENST00000615080 856 ntTSL 5 BASIC12.8□□□□□ -0.36
GCM1Q9NP62 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC12.8□□□□□ -0.36
GCM1Q9NP62 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GCM1Q9NP62 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
GCM1Q9NP62 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC12.8□□□□□ -0.36
GCM1Q9NP62 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GCM1Q9NP62 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GCM1Q9NP62 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GCM1Q9NP62 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC12.8□□□□□ -0.36
GCM1Q9NP62 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
GCM1Q9NP62 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GCM1Q9NP62 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
GCM1Q9NP62 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
GCM1Q9NP62 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GCM1Q9NP62 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GCM1Q9NP62 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GCM1Q9NP62 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
GCM1Q9NP62 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GCM1Q9NP62 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC12.8□□□□□ -0.36
GCM1Q9NP62 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
GCM1Q9NP62 AC006058.4-201ENST00000624016 1670 ntBASIC12.8□□□□□ -0.36
GCM1Q9NP62 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
GCM1Q9NP62 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.8□□□□□ -0.36
GCM1Q9NP62 ACE3P-201ENST00000423435 1973 ntBASIC12.8□□□□□ -0.36
GCM1Q9NP62 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC12.8□□□□□ -0.36
GCM1Q9NP62 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
GCM1Q9NP62 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC12.79□□□□□ -0.36
GCM1Q9NP62 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GCM1Q9NP62 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.79□□□□□ -0.36
GCM1Q9NP62 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GCM1Q9NP62 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GCM1Q9NP62 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GCM1Q9NP62 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GCM1Q9NP62 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
GCM1Q9NP62 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GCM1Q9NP62 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC12.79□□□□□ -0.36
GCM1Q9NP62 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
GCM1Q9NP62 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
GCM1Q9NP62 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
GCM1Q9NP62 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
GCM1Q9NP62 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
GCM1Q9NP62 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
GCM1Q9NP62 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GCM1Q9NP62 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
GCM1Q9NP62 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GCM1Q9NP62 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC12.79□□□□□ -0.36
GCM1Q9NP62 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC12.79□□□□□ -0.36
GCM1Q9NP62 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GCM1Q9NP62 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GCM1Q9NP62 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC12.79□□□□□ -0.36
GCM1Q9NP62 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
GCM1Q9NP62 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GCM1Q9NP62 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GCM1Q9NP62 MIR1909-201ENST00000411312 80 ntBASIC12.79□□□□□ -0.36
GCM1Q9NP62 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
GCM1Q9NP62 CNN2P8-201ENST00000421872 913 ntBASIC12.79□□□□□ -0.36
GCM1Q9NP62 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC12.79□□□□□ -0.36
GCM1Q9NP62 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC12.79□□□□□ -0.36
GCM1Q9NP62 KLF2P4-201ENST00000451959 1225 ntBASIC12.79□□□□□ -0.36
GCM1Q9NP62 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
GCM1Q9NP62 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
GCM1Q9NP62 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC12.79□□□□□ -0.36
GCM1Q9NP62 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC12.79□□□□□ -0.36
GCM1Q9NP62 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC12.79□□□□□ -0.36
GCM1Q9NP62 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC12.79□□□□□ -0.36
GCM1Q9NP62 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms