Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC11.38□□□□□ -0.59
VGLL1Q99990 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
VGLL1Q99990 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
VGLL1Q99990 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
VGLL1Q99990 Z92544.3-201ENST00000624747 417 ntBASIC11.38□□□□□ -0.59
VGLL1Q99990 AC079781.4-201ENST00000641908 219 ntBASIC11.38□□□□□ -0.59
VGLL1Q99990 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VGLL1Q99990 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC11.38□□□□□ -0.59
VGLL1Q99990 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VGLL1Q99990 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
VGLL1Q99990 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VGLL1Q99990 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
VGLL1Q99990 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VGLL1Q99990 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
VGLL1Q99990 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
VGLL1Q99990 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VGLL1Q99990 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
VGLL1Q99990 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC11.38□□□□□ -0.59
VGLL1Q99990 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
VGLL1Q99990 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VGLL1Q99990 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VGLL1Q99990 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
VGLL1Q99990 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
VGLL1Q99990 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
VGLL1Q99990 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VGLL1Q99990 AC023090.2-201ENST00000625182 2110 ntBASIC11.38□□□□□ -0.59
VGLL1Q99990 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VGLL1Q99990 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC11.38□□□□□ -0.59
VGLL1Q99990 AC027612.1-201ENST00000445234 2395 ntBASIC11.38□□□□□ -0.59
VGLL1Q99990 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VGLL1Q99990 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VGLL1Q99990 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
VGLL1Q99990 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
VGLL1Q99990 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
VGLL1Q99990 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
VGLL1Q99990 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
VGLL1Q99990 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
VGLL1Q99990 TUBB3P1-201ENST00000405796 1332 ntBASIC11.37□□□□□ -0.59
VGLL1Q99990 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC11.37□□□□□ -0.59
VGLL1Q99990 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC11.37□□□□□ -0.59
VGLL1Q99990 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VGLL1Q99990 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
VGLL1Q99990 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VGLL1Q99990 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC11.37□□□□□ -0.59
VGLL1Q99990 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC11.37□□□□□ -0.59
VGLL1Q99990 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC11.37□□□□□ -0.59
VGLL1Q99990 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC11.37□□□□□ -0.59
VGLL1Q99990 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
VGLL1Q99990 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
VGLL1Q99990 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC11.37□□□□□ -0.59
VGLL1Q99990 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VGLL1Q99990 GALC-206ENST00000544807 2528 ntTSL 2 BASIC11.37□□□□□ -0.59
VGLL1Q99990 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
VGLL1Q99990 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VGLL1Q99990 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VGLL1Q99990 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC11.37□□□□□ -0.59
VGLL1Q99990 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
VGLL1Q99990 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
VGLL1Q99990 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
VGLL1Q99990 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
VGLL1Q99990 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC11.37□□□□□ -0.59
VGLL1Q99990 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC11.37□□□□□ -0.59
VGLL1Q99990 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC11.37□□□□□ -0.59
VGLL1Q99990 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC11.37□□□□□ -0.59
VGLL1Q99990 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC11.37□□□□□ -0.59
VGLL1Q99990 AC125807.1-201ENST00000483097 614 ntBASIC11.37□□□□□ -0.59
VGLL1Q99990 HLA-J-203ENST00000494367 1087 ntBASIC11.37□□□□□ -0.59
VGLL1Q99990 AC022447.6-201ENST00000515522 438 ntBASIC11.37□□□□□ -0.59
VGLL1Q99990 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC11.37□□□□□ -0.59
VGLL1Q99990 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
VGLL1Q99990 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC11.37□□□□□ -0.59
VGLL1Q99990 SNHG9-202ENST00000564014 471 ntBASIC11.37□□□□□ -0.59
VGLL1Q99990 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC11.37□□□□□ -0.59
VGLL1Q99990 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC11.37□□□□□ -0.59
VGLL1Q99990 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC11.37□□□□□ -0.59
VGLL1Q99990 AL596442.2-201ENST00000610240 980 ntBASIC11.37□□□□□ -0.59
VGLL1Q99990 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
VGLL1Q99990 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
VGLL1Q99990 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VGLL1Q99990 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
VGLL1Q99990 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC11.37□□□□□ -0.59
VGLL1Q99990 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VGLL1Q99990 RERG-209ENST00000546331 1383 ntTSL 2 BASIC11.37□□□□□ -0.59
VGLL1Q99990 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VGLL1Q99990 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
VGLL1Q99990 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
VGLL1Q99990 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC11.37□□□□□ -0.59
VGLL1Q99990 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VGLL1Q99990 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VGLL1Q99990 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
VGLL1Q99990 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
VGLL1Q99990 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
VGLL1Q99990 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
VGLL1Q99990 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC11.37□□□□□ -0.59
VGLL1Q99990 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
VGLL1Q99990 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
VGLL1Q99990 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
VGLL1Q99990 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC11.37□□□□□ -0.59
VGLL1Q99990 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC11.37□□□□□ -0.59
VGLL1Q99990 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms