Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.21■□□□□ 0.03
KDM1BQ8NB78 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
KDM1BQ8NB78 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.2■□□□□ 0.02
KDM1BQ8NB78 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
KDM1BQ8NB78 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KDM1BQ8NB78 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.2■□□□□ 0.02
KDM1BQ8NB78 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.2■□□□□ 0.02
KDM1BQ8NB78 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.2■□□□□ 0.02
KDM1BQ8NB78 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.2■□□□□ 0.02
KDM1BQ8NB78 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.2■□□□□ 0.02
KDM1BQ8NB78 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.2■□□□□ 0.02
KDM1BQ8NB78 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
KDM1BQ8NB78 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.2■□□□□ 0.02
KDM1BQ8NB78 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KDM1BQ8NB78 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KDM1BQ8NB78 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC15.2■□□□□ 0.02
KDM1BQ8NB78 CSH2-202ENST00000345366 598 ntTSL 5 BASIC15.2■□□□□ 0.02
KDM1BQ8NB78 RN7SKP230-201ENST00000365642 335 ntBASIC15.2■□□□□ 0.02
KDM1BQ8NB78 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KDM1BQ8NB78 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KDM1BQ8NB78 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
KDM1BQ8NB78 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.2■□□□□ 0.02
KDM1BQ8NB78 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.2■□□□□ 0.02
KDM1BQ8NB78 ARTN-209ENST00000479128 471 ntTSL 3 BASIC15.2■□□□□ 0.02
KDM1BQ8NB78 AC099548.2-209ENST00000480264 625 ntBASIC15.2■□□□□ 0.02
KDM1BQ8NB78 AC100850.1-201ENST00000506768 649 ntBASIC15.2■□□□□ 0.02
KDM1BQ8NB78 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KDM1BQ8NB78 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.2■□□□□ 0.02
KDM1BQ8NB78 MIR3615-201ENST00000581999 87 ntBASIC15.2■□□□□ 0.02
KDM1BQ8NB78 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.2■□□□□ 0.02
KDM1BQ8NB78 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.2■□□□□ 0.02
KDM1BQ8NB78 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
KDM1BQ8NB78 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.2■□□□□ 0.02
KDM1BQ8NB78 AL023803.2-201ENST00000620080 638 ntBASIC15.2■□□□□ 0.02
KDM1BQ8NB78 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.2■□□□□ 0.02
KDM1BQ8NB78 AC002472.3-201ENST00000640124 621 ntBASIC15.2■□□□□ 0.02
KDM1BQ8NB78 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
KDM1BQ8NB78 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
KDM1BQ8NB78 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
KDM1BQ8NB78 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
KDM1BQ8NB78 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
KDM1BQ8NB78 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
KDM1BQ8NB78 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
KDM1BQ8NB78 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
KDM1BQ8NB78 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.2■□□□□ 0.02
KDM1BQ8NB78 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
KDM1BQ8NB78 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KDM1BQ8NB78 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KDM1BQ8NB78 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KDM1BQ8NB78 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.19■□□□□ 0.02
KDM1BQ8NB78 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KDM1BQ8NB78 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.19■□□□□ 0.02
KDM1BQ8NB78 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.19■□□□□ 0.02
KDM1BQ8NB78 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
KDM1BQ8NB78 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
KDM1BQ8NB78 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KDM1BQ8NB78 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
KDM1BQ8NB78 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.19■□□□□ 0.02
KDM1BQ8NB78 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
KDM1BQ8NB78 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
KDM1BQ8NB78 AC010141.1-201ENST00000411585 623 ntBASIC15.19■□□□□ 0.02
KDM1BQ8NB78 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.19■□□□□ 0.02
KDM1BQ8NB78 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC15.19■□□□□ 0.02
KDM1BQ8NB78 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.19■□□□□ 0.02
KDM1BQ8NB78 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC15.19■□□□□ 0.02
KDM1BQ8NB78 KC6-205ENST00000599934 556 ntTSL 4 BASIC15.19■□□□□ 0.02
KDM1BQ8NB78 AL358472.3-201ENST00000608147 415 ntBASIC15.19■□□□□ 0.02
KDM1BQ8NB78 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
KDM1BQ8NB78 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
KDM1BQ8NB78 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.19■□□□□ 0.02
KDM1BQ8NB78 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
KDM1BQ8NB78 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.19■□□□□ 0.02
KDM1BQ8NB78 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
KDM1BQ8NB78 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
KDM1BQ8NB78 AC138028.6-201ENST00000616106 1482 ntBASIC15.19■□□□□ 0.02
KDM1BQ8NB78 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KDM1BQ8NB78 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.19■□□□□ 0.02
KDM1BQ8NB78 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.19■□□□□ 0.02
KDM1BQ8NB78 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
KDM1BQ8NB78 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
KDM1BQ8NB78 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.18■□□□□ 0.02
KDM1BQ8NB78 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
KDM1BQ8NB78 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KDM1BQ8NB78 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
KDM1BQ8NB78 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
KDM1BQ8NB78 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
KDM1BQ8NB78 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
KDM1BQ8NB78 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
KDM1BQ8NB78 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KDM1BQ8NB78 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KDM1BQ8NB78 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KDM1BQ8NB78 GRK6P1-201ENST00000400595 1711 ntBASIC15.18■□□□□ 0.02
KDM1BQ8NB78 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
KDM1BQ8NB78 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
KDM1BQ8NB78 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KDM1BQ8NB78 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
KDM1BQ8NB78 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
KDM1BQ8NB78 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
KDM1BQ8NB78 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
KDM1BQ8NB78 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms