Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LPCAT4Q643R3 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LPCAT4Q643R3 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LPCAT4Q643R3 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
LPCAT4Q643R3 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC14.09□□□□□ -0.15
LPCAT4Q643R3 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
LPCAT4Q643R3 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC14.09□□□□□ -0.15
LPCAT4Q643R3 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LPCAT4Q643R3 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LPCAT4Q643R3 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
LPCAT4Q643R3 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
LPCAT4Q643R3 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LPCAT4Q643R3 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LPCAT4Q643R3 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
LPCAT4Q643R3 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LPCAT4Q643R3 CICP1-201ENST00000416803 2410 ntBASIC14.09□□□□□ -0.15
LPCAT4Q643R3 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
LPCAT4Q643R3 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
LPCAT4Q643R3 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
LPCAT4Q643R3 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
LPCAT4Q643R3 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.08□□□□□ -0.15
LPCAT4Q643R3 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.08□□□□□ -0.16
LPCAT4Q643R3 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LPCAT4Q643R3 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.08□□□□□ -0.16
LPCAT4Q643R3 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LPCAT4Q643R3 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LPCAT4Q643R3 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.08□□□□□ -0.16
LPCAT4Q643R3 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
LPCAT4Q643R3 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LPCAT4Q643R3 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LPCAT4Q643R3 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LPCAT4Q643R3 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LPCAT4Q643R3 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LPCAT4Q643R3 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LPCAT4Q643R3 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
LPCAT4Q643R3 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
LPCAT4Q643R3 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.08□□□□□ -0.16
LPCAT4Q643R3 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.08□□□□□ -0.16
LPCAT4Q643R3 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
LPCAT4Q643R3 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.08□□□□□ -0.16
LPCAT4Q643R3 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.08□□□□□ -0.16
LPCAT4Q643R3 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.08□□□□□ -0.16
LPCAT4Q643R3 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.08□□□□□ -0.16
LPCAT4Q643R3 AC092910.1-201ENST00000482027 1129 ntBASIC14.08□□□□□ -0.16
LPCAT4Q643R3 UNC93B7-201ENST00000509439 705 ntBASIC14.08□□□□□ -0.16
LPCAT4Q643R3 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.08□□□□□ -0.16
LPCAT4Q643R3 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.08□□□□□ -0.16
LPCAT4Q643R3 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.08□□□□□ -0.16
LPCAT4Q643R3 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
LPCAT4Q643R3 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.08□□□□□ -0.16
LPCAT4Q643R3 NCLP1-201ENST00000445357 1963 ntBASIC14.08□□□□□ -0.16
LPCAT4Q643R3 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC14.08□□□□□ -0.16
LPCAT4Q643R3 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LPCAT4Q643R3 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LPCAT4Q643R3 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LPCAT4Q643R3 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.08□□□□□ -0.16
LPCAT4Q643R3 AC073869.1-201ENST00000415574 2762 ntBASIC14.08□□□□□ -0.16
LPCAT4Q643R3 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LPCAT4Q643R3 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LPCAT4Q643R3 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LPCAT4Q643R3 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.08□□□□□ -0.16
LPCAT4Q643R3 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
LPCAT4Q643R3 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.08□□□□□ -0.16
LPCAT4Q643R3 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LPCAT4Q643R3 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LPCAT4Q643R3 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
LPCAT4Q643R3 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LPCAT4Q643R3 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LPCAT4Q643R3 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LPCAT4Q643R3 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC14.07□□□□□ -0.16
LPCAT4Q643R3 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
LPCAT4Q643R3 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LPCAT4Q643R3 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LPCAT4Q643R3 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
LPCAT4Q643R3 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LPCAT4Q643R3 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
LPCAT4Q643R3 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.07□□□□□ -0.16
LPCAT4Q643R3 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LPCAT4Q643R3 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LPCAT4Q643R3 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
LPCAT4Q643R3 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LPCAT4Q643R3 STK25-235ENST00000543554 2556 ntTSL 2 BASIC14.07□□□□□ -0.16
LPCAT4Q643R3 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LPCAT4Q643R3 KHSRPP1-201ENST00000427983 1768 ntBASIC14.07□□□□□ -0.16
LPCAT4Q643R3 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LPCAT4Q643R3 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
LPCAT4Q643R3 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC14.07□□□□□ -0.16
LPCAT4Q643R3 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.07□□□□□ -0.16
LPCAT4Q643R3 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LPCAT4Q643R3 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LPCAT4Q643R3 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
LPCAT4Q643R3 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LPCAT4Q643R3 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.07□□□□□ -0.16
LPCAT4Q643R3 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LPCAT4Q643R3 HLA-H-201ENST00000383620 1096 ntBASIC14.07□□□□□ -0.16
LPCAT4Q643R3 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.07□□□□□ -0.16
LPCAT4Q643R3 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.07□□□□□ -0.16
LPCAT4Q643R3 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.07□□□□□ -0.16
LPCAT4Q643R3 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.07□□□□□ -0.16
LPCAT4Q643R3 AF186996.4-201ENST00000467186 377 ntBASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms