Protein–RNA interactions for Protein: Q3SY56

SP6, Transcription factor Sp6, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP6Q3SY56 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SP6Q3SY56 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.43□□□□□ -0.42
SP6Q3SY56 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SP6Q3SY56 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.43□□□□□ -0.42
SP6Q3SY56 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SP6Q3SY56 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SP6Q3SY56 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.43□□□□□ -0.42
SP6Q3SY56 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
SP6Q3SY56 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
SP6Q3SY56 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
SP6Q3SY56 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
SP6Q3SY56 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
SP6Q3SY56 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.43□□□□□ -0.42
SP6Q3SY56 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.43□□□□□ -0.42
SP6Q3SY56 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC12.43□□□□□ -0.42
SP6Q3SY56 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SP6Q3SY56 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SP6Q3SY56 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SP6Q3SY56 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC12.42□□□□□ -0.42
SP6Q3SY56 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.42□□□□□ -0.42
SP6Q3SY56 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
SP6Q3SY56 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.42□□□□□ -0.42
SP6Q3SY56 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.42□□□□□ -0.42
SP6Q3SY56 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SP6Q3SY56 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SP6Q3SY56 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SP6Q3SY56 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SP6Q3SY56 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SP6Q3SY56 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
SP6Q3SY56 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SP6Q3SY56 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SP6Q3SY56 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SP6Q3SY56 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SP6Q3SY56 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SP6Q3SY56 TOMM22P5-201ENST00000416399 439 ntBASIC12.42□□□□□ -0.42
SP6Q3SY56 RAD18-204ENST00000418463 563 ntTSL 4 BASIC12.42□□□□□ -0.42
SP6Q3SY56 RAD18-205ENST00000421052 582 ntTSL 3 BASIC12.42□□□□□ -0.42
SP6Q3SY56 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC12.42□□□□□ -0.42
SP6Q3SY56 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC12.42□□□□□ -0.42
SP6Q3SY56 GPS2P2-201ENST00000430745 888 ntBASIC12.42□□□□□ -0.42
SP6Q3SY56 MKNK2P1-201ENST00000437526 628 ntBASIC12.42□□□□□ -0.42
SP6Q3SY56 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SP6Q3SY56 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SP6Q3SY56 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC12.42□□□□□ -0.42
SP6Q3SY56 CEND1P1-201ENST00000451006 455 ntBASIC12.42□□□□□ -0.42
SP6Q3SY56 SERBP1P3-201ENST00000459980 809 ntBASIC12.42□□□□□ -0.42
SP6Q3SY56 AC004066.1-201ENST00000502488 802 ntBASIC12.42□□□□□ -0.42
SP6Q3SY56 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SP6Q3SY56 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC12.42□□□□□ -0.42
SP6Q3SY56 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC12.42□□□□□ -0.42
SP6Q3SY56 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC12.42□□□□□ -0.42
SP6Q3SY56 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SP6Q3SY56 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.42□□□□□ -0.42
SP6Q3SY56 AC093520.2-201ENST00000561830 333 ntBASIC12.42□□□□□ -0.42
SP6Q3SY56 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC12.42□□□□□ -0.42
SP6Q3SY56 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC12.42□□□□□ -0.42
SP6Q3SY56 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.42□□□□□ -0.42
SP6Q3SY56 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC12.42□□□□□ -0.42
SP6Q3SY56 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.42□□□□□ -0.42
SP6Q3SY56 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC12.42□□□□□ -0.42
SP6Q3SY56 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SP6Q3SY56 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SP6Q3SY56 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
SP6Q3SY56 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SP6Q3SY56 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SP6Q3SY56 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.42□□□□□ -0.42
SP6Q3SY56 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.42□□□□□ -0.42
SP6Q3SY56 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
SP6Q3SY56 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
SP6Q3SY56 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SP6Q3SY56 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SP6Q3SY56 KRT8P24-201ENST00000560290 1559 ntBASIC12.42□□□□□ -0.42
SP6Q3SY56 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SP6Q3SY56 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SP6Q3SY56 TCAF1P1-201ENST00000414990 2232 ntBASIC12.42□□□□□ -0.42
SP6Q3SY56 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SP6Q3SY56 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.42□□□□□ -0.42
SP6Q3SY56 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
SP6Q3SY56 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC12.42□□□□□ -0.42
SP6Q3SY56 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SP6Q3SY56 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SP6Q3SY56 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SP6Q3SY56 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SP6Q3SY56 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SP6Q3SY56 CETN4P-206ENST00000642099 2168 ntBASIC12.42□□□□□ -0.42
SP6Q3SY56 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
SP6Q3SY56 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SP6Q3SY56 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SP6Q3SY56 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
SP6Q3SY56 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
SP6Q3SY56 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SP6Q3SY56 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SP6Q3SY56 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SP6Q3SY56 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
SP6Q3SY56 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.41□□□□□ -0.42
SP6Q3SY56 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SP6Q3SY56 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.41□□□□□ -0.42
SP6Q3SY56 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SP6Q3SY56 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
SP6Q3SY56 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms