Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
NCKAP1LP55160 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.24■□□□□ 0.19
NCKAP1LP55160 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.24■□□□□ 0.19
NCKAP1LP55160 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NCKAP1LP55160 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NCKAP1LP55160 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC16.24■□□□□ 0.19
NCKAP1LP55160 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC16.24■□□□□ 0.19
NCKAP1LP55160 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC16.24■□□□□ 0.19
NCKAP1LP55160 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.24■□□□□ 0.19
NCKAP1LP55160 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC16.24■□□□□ 0.19
NCKAP1LP55160 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.24■□□□□ 0.19
NCKAP1LP55160 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC16.24■□□□□ 0.19
NCKAP1LP55160 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NCKAP1LP55160 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC16.24■□□□□ 0.19
NCKAP1LP55160 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC16.24■□□□□ 0.19
NCKAP1LP55160 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC16.24■□□□□ 0.19
NCKAP1LP55160 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
NCKAP1LP55160 AL096828.3-201ENST00000615354 462 ntBASIC16.24■□□□□ 0.19
NCKAP1LP55160 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC16.24■□□□□ 0.19
NCKAP1LP55160 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC16.24■□□□□ 0.19
NCKAP1LP55160 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
NCKAP1LP55160 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NCKAP1LP55160 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NCKAP1LP55160 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
NCKAP1LP55160 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NCKAP1LP55160 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NCKAP1LP55160 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC16.24■□□□□ 0.19
NCKAP1LP55160 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
NCKAP1LP55160 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NCKAP1LP55160 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NCKAP1LP55160 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NCKAP1LP55160 KRT8P28-201ENST00000433288 1390 ntBASIC16.24■□□□□ 0.19
NCKAP1LP55160 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NCKAP1LP55160 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NCKAP1LP55160 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NCKAP1LP55160 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
NCKAP1LP55160 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NCKAP1LP55160 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NCKAP1LP55160 AC006504.5-208ENST00000588784 2401 ntBASIC16.24■□□□□ 0.19
NCKAP1LP55160 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NCKAP1LP55160 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
NCKAP1LP55160 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.23■□□□□ 0.19
NCKAP1LP55160 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NCKAP1LP55160 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC16.23■□□□□ 0.19
NCKAP1LP55160 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NCKAP1LP55160 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NCKAP1LP55160 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
NCKAP1LP55160 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NCKAP1LP55160 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NCKAP1LP55160 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NCKAP1LP55160 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
NCKAP1LP55160 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NCKAP1LP55160 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
NCKAP1LP55160 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NCKAP1LP55160 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NCKAP1LP55160 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
NCKAP1LP55160 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NCKAP1LP55160 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NCKAP1LP55160 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
NCKAP1LP55160 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.23■□□□□ 0.19
NCKAP1LP55160 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NCKAP1LP55160 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
NCKAP1LP55160 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NCKAP1LP55160 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NCKAP1LP55160 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NCKAP1LP55160 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NCKAP1LP55160 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.23■□□□□ 0.19
NCKAP1LP55160 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NCKAP1LP55160 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.23■□□□□ 0.19
NCKAP1LP55160 MIR663B-201ENST00000408361 115 ntBASIC16.23■□□□□ 0.19
NCKAP1LP55160 MIR1908-201ENST00000410394 80 ntBASIC16.23■□□□□ 0.19
NCKAP1LP55160 BTBD6P1-201ENST00000412176 1267 ntBASIC16.23■□□□□ 0.19
NCKAP1LP55160 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.23■□□□□ 0.19
NCKAP1LP55160 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NCKAP1LP55160 PTPA-215ENST00000432124 567 ntTSL 4 BASIC16.23■□□□□ 0.19
NCKAP1LP55160 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.23■□□□□ 0.19
NCKAP1LP55160 AL035414.1-201ENST00000451327 857 ntBASIC16.23■□□□□ 0.19
NCKAP1LP55160 AL591846.1-201ENST00000451736 433 ntBASIC16.23■□□□□ 0.19
NCKAP1LP55160 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.23■□□□□ 0.19
NCKAP1LP55160 MYADML-201ENST00000474610 2147 ntBASIC16.23■□□□□ 0.19
NCKAP1LP55160 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC16.23■□□□□ 0.19
NCKAP1LP55160 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.23■□□□□ 0.19
NCKAP1LP55160 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NCKAP1LP55160 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NCKAP1LP55160 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
NCKAP1LP55160 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC16.23■□□□□ 0.19
NCKAP1LP55160 KLK11-210ENST00000600362 759 ntTSL 3 BASIC16.23■□□□□ 0.19
NCKAP1LP55160 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NCKAP1LP55160 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NCKAP1LP55160 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
NCKAP1LP55160 REXO1L6P-201ENST00000603433 1515 ntBASIC16.23■□□□□ 0.19
NCKAP1LP55160 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC16.23■□□□□ 0.19
NCKAP1LP55160 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NCKAP1LP55160 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC16.23■□□□□ 0.19
NCKAP1LP55160 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.23■□□□□ 0.19
NCKAP1LP55160 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.23■□□□□ 0.19
NCKAP1LP55160 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
NCKAP1LP55160 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
NCKAP1LP55160 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NCKAP1LP55160 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms