Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.25□□□□□ -0.13
NR1H2P55055 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
NR1H2P55055 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.25□□□□□ -0.13
NR1H2P55055 RN7SL204P-201ENST00000582831 262 ntBASIC14.25□□□□□ -0.13
NR1H2P55055 AC009118.2-201ENST00000613275 655 ntBASIC14.25□□□□□ -0.13
NR1H2P55055 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.25□□□□□ -0.13
NR1H2P55055 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
NR1H2P55055 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC14.25□□□□□ -0.13
NR1H2P55055 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NR1H2P55055 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NR1H2P55055 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NR1H2P55055 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NR1H2P55055 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NR1H2P55055 AC114271.1-201ENST00000612689 2813 ntBASIC14.25□□□□□ -0.13
NR1H2P55055 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NR1H2P55055 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NR1H2P55055 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NR1H2P55055 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NR1H2P55055 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NR1H2P55055 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
NR1H2P55055 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NR1H2P55055 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.25□□□□□ -0.13
NR1H2P55055 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NR1H2P55055 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
NR1H2P55055 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NR1H2P55055 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
NR1H2P55055 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC14.25□□□□□ -0.13
NR1H2P55055 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NR1H2P55055 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NR1H2P55055 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC14.25□□□□□ -0.13
NR1H2P55055 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.25□□□□□ -0.13
NR1H2P55055 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.25□□□□□ -0.13
NR1H2P55055 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.25□□□□□ -0.13
NR1H2P55055 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NR1H2P55055 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
NR1H2P55055 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
NR1H2P55055 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NR1H2P55055 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
NR1H2P55055 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NR1H2P55055 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
NR1H2P55055 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NR1H2P55055 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
NR1H2P55055 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NR1H2P55055 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC14.24□□□□□ -0.13
NR1H2P55055 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
NR1H2P55055 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NR1H2P55055 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.24□□□□□ -0.13
NR1H2P55055 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NR1H2P55055 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NR1H2P55055 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
NR1H2P55055 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.24□□□□□ -0.13
NR1H2P55055 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.24□□□□□ -0.13
NR1H2P55055 AC092580.3-201ENST00000430932 139 ntBASIC14.24□□□□□ -0.13
NR1H2P55055 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NR1H2P55055 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.24□□□□□ -0.13
NR1H2P55055 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.24□□□□□ -0.13
NR1H2P55055 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.24□□□□□ -0.13
NR1H2P55055 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.24□□□□□ -0.13
NR1H2P55055 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.24□□□□□ -0.13
NR1H2P55055 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.24□□□□□ -0.13
NR1H2P55055 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.24□□□□□ -0.13
NR1H2P55055 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NR1H2P55055 AC027307.3-201ENST00000594262 1100 ntBASIC14.24□□□□□ -0.13
NR1H2P55055 AC008761.3-201ENST00000624803 892 ntBASIC14.24□□□□□ -0.13
NR1H2P55055 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
NR1H2P55055 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NR1H2P55055 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NR1H2P55055 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NR1H2P55055 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC14.24□□□□□ -0.13
NR1H2P55055 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NR1H2P55055 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NR1H2P55055 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NR1H2P55055 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
NR1H2P55055 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.24□□□□□ -0.13
NR1H2P55055 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
NR1H2P55055 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NR1H2P55055 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
NR1H2P55055 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NR1H2P55055 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
NR1H2P55055 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NR1H2P55055 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC14.23□□□□□ -0.13
NR1H2P55055 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NR1H2P55055 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
NR1H2P55055 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
NR1H2P55055 BEND3P3-201ENST00000611030 2440 ntBASIC14.23□□□□□ -0.13
NR1H2P55055 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NR1H2P55055 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NR1H2P55055 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NR1H2P55055 CICP11-201ENST00000434745 2827 ntBASIC14.23□□□□□ -0.13
NR1H2P55055 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NR1H2P55055 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.23□□□□□ -0.13
NR1H2P55055 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.23□□□□□ -0.13
NR1H2P55055 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
NR1H2P55055 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.23□□□□□ -0.13
NR1H2P55055 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.23□□□□□ -0.13
NR1H2P55055 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.23□□□□□ -0.13
NR1H2P55055 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.23□□□□□ -0.13
NR1H2P55055 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
NR1H2P55055 LINC02560-201ENST00000596379 459 ntBASIC14.23□□□□□ -0.13
NR1H2P55055 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms