Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.41■□□□□ 0.22
GPC3P51654 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.41■□□□□ 0.22
GPC3P51654 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC16.41■□□□□ 0.22
GPC3P51654 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.41■□□□□ 0.22
GPC3P51654 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GPC3P51654 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GPC3P51654 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
GPC3P51654 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.4■□□□□ 0.22
GPC3P51654 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GPC3P51654 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.4■□□□□ 0.22
GPC3P51654 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GPC3P51654 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GPC3P51654 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.4■□□□□ 0.22
GPC3P51654 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GPC3P51654 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
GPC3P51654 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GPC3P51654 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.4■□□□□ 0.22
GPC3P51654 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GPC3P51654 AC016700.1-201ENST00000429424 312 ntBASIC16.4■□□□□ 0.22
GPC3P51654 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC16.4■□□□□ 0.22
GPC3P51654 REEP1-202ENST00000453231 940 ntTSL 2 BASIC16.4■□□□□ 0.22
GPC3P51654 RNMTL1P1-201ENST00000454103 560 ntBASIC16.4■□□□□ 0.22
GPC3P51654 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC16.4■□□□□ 0.22
GPC3P51654 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC16.4■□□□□ 0.22
GPC3P51654 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.4■□□□□ 0.22
GPC3P51654 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC16.4■□□□□ 0.22
GPC3P51654 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC16.4■□□□□ 0.22
GPC3P51654 DUX4L46-201ENST00000566845 751 ntBASIC16.4■□□□□ 0.22
GPC3P51654 BNIP3P13-201ENST00000599968 566 ntBASIC16.4■□□□□ 0.22
GPC3P51654 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GPC3P51654 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC16.4■□□□□ 0.22
GPC3P51654 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
GPC3P51654 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GPC3P51654 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.4■□□□□ 0.22
GPC3P51654 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GPC3P51654 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
GPC3P51654 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GPC3P51654 SALL4P5-201ENST00000419001 1760 ntBASIC16.4■□□□□ 0.22
GPC3P51654 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.4■□□□□ 0.22
GPC3P51654 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GPC3P51654 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
GPC3P51654 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
GPC3P51654 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GPC3P51654 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.4■□□□□ 0.22
GPC3P51654 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.4■□□□□ 0.22
GPC3P51654 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GPC3P51654 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
GPC3P51654 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GPC3P51654 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
GPC3P51654 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
GPC3P51654 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
GPC3P51654 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
GPC3P51654 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GPC3P51654 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
GPC3P51654 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.39■□□□□ 0.21
GPC3P51654 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
GPC3P51654 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.39■□□□□ 0.21
GPC3P51654 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GPC3P51654 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GPC3P51654 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GPC3P51654 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
GPC3P51654 DPM3-202ENST00000368399 517 ntBASIC16.39■□□□□ 0.21
GPC3P51654 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
GPC3P51654 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
GPC3P51654 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.39■□□□□ 0.21
GPC3P51654 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC16.39■□□□□ 0.21
GPC3P51654 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GPC3P51654 AC005077.2-201ENST00000449786 690 ntBASIC16.39■□□□□ 0.21
GPC3P51654 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC16.39■□□□□ 0.21
GPC3P51654 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC16.39■□□□□ 0.21
GPC3P51654 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC16.39■□□□□ 0.21
GPC3P51654 AC138649.2-201ENST00000615886 705 ntBASIC16.39■□□□□ 0.21
GPC3P51654 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.39■□□□□ 0.21
GPC3P51654 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GPC3P51654 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
GPC3P51654 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GPC3P51654 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GPC3P51654 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GPC3P51654 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.39■□□□□ 0.21
GPC3P51654 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
GPC3P51654 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GPC3P51654 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GPC3P51654 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.39■□□□□ 0.21
GPC3P51654 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
GPC3P51654 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
GPC3P51654 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.39■□□□□ 0.21
GPC3P51654 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.39■□□□□ 0.21
GPC3P51654 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.39■□□□□ 0.21
GPC3P51654 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.39■□□□□ 0.21
GPC3P51654 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
GPC3P51654 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.38■□□□□ 0.21
GPC3P51654 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.38■□□□□ 0.21
GPC3P51654 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GPC3P51654 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.38■□□□□ 0.21
GPC3P51654 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GPC3P51654 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GPC3P51654 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
GPC3P51654 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
GPC3P51654 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GPC3P51654 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms