Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 TBCB-211ENST00000589996 724 ntTSL 3 BASIC9.55□□□□□ -0.88
UBE2AP49459 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC9.55□□□□□ -0.88
UBE2AP49459 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC9.55□□□□□ -0.88
UBE2AP49459 GPR39-203ENST00000622084 900 ntTSL 5 BASIC9.55□□□□□ -0.88
UBE2AP49459 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC9.55□□□□□ -0.88
UBE2AP49459 AK4-201ENST00000327299 6836 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
UBE2AP49459 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
UBE2AP49459 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
UBE2AP49459 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC9.55□□□□□ -0.88
UBE2AP49459 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
UBE2AP49459 NKAP-201ENST00000371410 5963 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
UBE2AP49459 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
UBE2AP49459 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
UBE2AP49459 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC9.55□□□□□ -0.88
UBE2AP49459 FER1L5-207ENST00000641731 6294 ntAPPRIS ALT2 BASIC9.55□□□□□ -0.88
UBE2AP49459 LMCD1-201ENST00000157600 8405 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
UBE2AP49459 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
UBE2AP49459 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
UBE2AP49459 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
UBE2AP49459 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC9.55□□□□□ -0.88
UBE2AP49459 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
UBE2AP49459 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC9.55□□□□□ -0.88
UBE2AP49459 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
UBE2AP49459 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
UBE2AP49459 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC9.55□□□□□ -0.88
UBE2AP49459 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
UBE2AP49459 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
UBE2AP49459 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC9.55□□□□□ -0.88
UBE2AP49459 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
UBE2AP49459 ZNF646-201ENST00000300850 6892 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
UBE2AP49459 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
UBE2AP49459 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
UBE2AP49459 CACNA1C-204ENST00000347598 6655 ntAPPRIS P4 TSL 1 (best) BASIC9.54□□□□□ -0.88
UBE2AP49459 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
UBE2AP49459 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
UBE2AP49459 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC9.54□□□□□ -0.88
UBE2AP49459 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
UBE2AP49459 PTCD1-201ENST00000292478 5582 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
UBE2AP49459 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
UBE2AP49459 MFF-204ENST00000353339 2186 ntTSL 5 BASIC9.54□□□□□ -0.88
UBE2AP49459 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC9.54□□□□□ -0.88
UBE2AP49459 PANK3-201ENST00000239231 10506 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
UBE2AP49459 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC9.54□□□□□ -0.88
UBE2AP49459 ZBTB45P1-201ENST00000452761 1456 ntBASIC9.54□□□□□ -0.88
UBE2AP49459 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
UBE2AP49459 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
UBE2AP49459 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
UBE2AP49459 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC9.54□□□□□ -0.88
UBE2AP49459 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC9.54□□□□□ -0.88
UBE2AP49459 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
UBE2AP49459 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC9.54□□□□□ -0.88
UBE2AP49459 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
UBE2AP49459 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
UBE2AP49459 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC9.54□□□□□ -0.88
UBE2AP49459 ANKRD36B-201ENST00000258459 5986 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
UBE2AP49459 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
UBE2AP49459 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
UBE2AP49459 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
UBE2AP49459 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
UBE2AP49459 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC9.54□□□□□ -0.88
UBE2AP49459 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC9.54□□□□□ -0.88
UBE2AP49459 FAM8A3P-201ENST00000427218 844 ntBASIC9.54□□□□□ -0.88
UBE2AP49459 BASP1P1-201ENST00000430708 665 ntBASIC9.54□□□□□ -0.88
UBE2AP49459 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC9.54□□□□□ -0.88
UBE2AP49459 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
UBE2AP49459 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC9.54□□□□□ -0.88
UBE2AP49459 AC097493.3-201ENST00000509725 367 ntBASIC9.54□□□□□ -0.88
UBE2AP49459 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC9.54□□□□□ -0.88
UBE2AP49459 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC9.54□□□□□ -0.88
UBE2AP49459 AC135586.1-201ENST00000539323 574 ntBASIC9.54□□□□□ -0.88
UBE2AP49459 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC9.54□□□□□ -0.88
UBE2AP49459 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
UBE2AP49459 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC9.54□□□□□ -0.88
UBE2AP49459 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
UBE2AP49459 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
UBE2AP49459 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC9.54□□□□□ -0.88
UBE2AP49459 WDR88-203ENST00000592765 651 ntTSL 5 BASIC9.54□□□□□ -0.88
UBE2AP49459 AC011467.4-201ENST00000594891 528 ntBASIC9.54□□□□□ -0.88
UBE2AP49459 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC9.54□□□□□ -0.88
UBE2AP49459 AC106028.4-201ENST00000614509 607 ntBASIC9.54□□□□□ -0.88
UBE2AP49459 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC9.54□□□□□ -0.88
UBE2AP49459 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
UBE2AP49459 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
UBE2AP49459 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC9.54□□□□□ -0.88
UBE2AP49459 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC9.54□□□□□ -0.88
UBE2AP49459 PLB1-201ENST00000327757 5107 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
UBE2AP49459 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC9.54□□□□□ -0.88
UBE2AP49459 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
UBE2AP49459 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
UBE2AP49459 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
UBE2AP49459 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
UBE2AP49459 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
UBE2AP49459 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
UBE2AP49459 SLC45A4-203ENST00000519067 7483 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
UBE2AP49459 AC232323.1-201ENST00000540724 2099 ntBASIC9.54□□□□□ -0.88
UBE2AP49459 REXO1L5P-201ENST00000622260 2098 ntBASIC9.54□□□□□ -0.88
UBE2AP49459 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC9.54□□□□□ -0.88
UBE2AP49459 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
UBE2AP49459 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
UBE2AP49459 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms