Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.65□□□□□ -0.22
CENPAP49450 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.65□□□□□ -0.22
CENPAP49450 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.65□□□□□ -0.22
CENPAP49450 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CENPAP49450 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.65□□□□□ -0.22
CENPAP49450 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.65□□□□□ -0.22
CENPAP49450 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.65□□□□□ -0.22
CENPAP49450 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CENPAP49450 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.65□□□□□ -0.22
CENPAP49450 AC106028.4-201ENST00000614509 607 ntBASIC13.65□□□□□ -0.22
CENPAP49450 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.65□□□□□ -0.22
CENPAP49450 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.65□□□□□ -0.22
CENPAP49450 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CENPAP49450 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CENPAP49450 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CENPAP49450 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CENPAP49450 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CENPAP49450 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CENPAP49450 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CENPAP49450 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CENPAP49450 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.65□□□□□ -0.22
CENPAP49450 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CENPAP49450 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CENPAP49450 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CENPAP49450 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CENPAP49450 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CENPAP49450 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
CENPAP49450 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
CENPAP49450 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
CENPAP49450 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CENPAP49450 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CENPAP49450 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.64□□□□□ -0.23
CENPAP49450 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CENPAP49450 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CENPAP49450 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CENPAP49450 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.64□□□□□ -0.23
CENPAP49450 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CENPAP49450 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
CENPAP49450 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CENPAP49450 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CENPAP49450 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CENPAP49450 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CENPAP49450 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CENPAP49450 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CENPAP49450 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CENPAP49450 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
CENPAP49450 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CENPAP49450 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.64□□□□□ -0.23
CENPAP49450 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CENPAP49450 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CENPAP49450 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.64□□□□□ -0.23
CENPAP49450 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CENPAP49450 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
CENPAP49450 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CENPAP49450 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CENPAP49450 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC13.64□□□□□ -0.23
CENPAP49450 PON3-203ENST00000427422 894 ntTSL 3 BASIC13.64□□□□□ -0.23
CENPAP49450 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.64□□□□□ -0.23
CENPAP49450 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.64□□□□□ -0.23
CENPAP49450 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.64□□□□□ -0.23
CENPAP49450 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CENPAP49450 MEIS3P1-201ENST00000495167 958 ntBASIC13.64□□□□□ -0.23
CENPAP49450 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.64□□□□□ -0.23
CENPAP49450 AC135586.1-201ENST00000539323 574 ntBASIC13.64□□□□□ -0.23
CENPAP49450 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.64□□□□□ -0.23
CENPAP49450 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CENPAP49450 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.64□□□□□ -0.23
CENPAP49450 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.64□□□□□ -0.23
CENPAP49450 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
CENPAP49450 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CENPAP49450 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
CENPAP49450 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.64□□□□□ -0.23
CENPAP49450 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CENPAP49450 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.64□□□□□ -0.23
CENPAP49450 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CENPAP49450 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
CENPAP49450 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CENPAP49450 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13.64□□□□□ -0.23
CENPAP49450 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.64□□□□□ -0.23
CENPAP49450 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
CENPAP49450 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CENPAP49450 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CENPAP49450 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CENPAP49450 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CENPAP49450 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CENPAP49450 AC010327.5-201ENST00000586923 3061 ntBASIC13.63□□□□□ -0.23
CENPAP49450 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.63□□□□□ -0.23
CENPAP49450 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CENPAP49450 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
CENPAP49450 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CENPAP49450 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CENPAP49450 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.63□□□□□ -0.23
CENPAP49450 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CENPAP49450 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CENPAP49450 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CENPAP49450 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CENPAP49450 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CENPAP49450 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CENPAP49450 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CENPAP49450 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms