Protein–RNA interactions for Protein: P28472

GABRB3, Gamma-aminobutyric acid receptor subunit beta-3, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3P28472 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
GABRB3P28472 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.04
GABRB3P28472 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
GABRB3P28472 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
GABRB3P28472 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
GABRB3P28472 AC107918.4-201ENST00000641966 3141 ntBASIC14.77□□□□□ -0.04
GABRB3P28472 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
GABRB3P28472 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
GABRB3P28472 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
GABRB3P28472 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
GABRB3P28472 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
GABRB3P28472 AC009093.2-202ENST00000620513 2079 ntBASIC14.77□□□□□ -0.04
GABRB3P28472 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.77□□□□□ -0.04
GABRB3P28472 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
GABRB3P28472 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
GABRB3P28472 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
GABRB3P28472 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.77□□□□□ -0.04
GABRB3P28472 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
GABRB3P28472 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
GABRB3P28472 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
GABRB3P28472 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
GABRB3P28472 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.77□□□□□ -0.04
GABRB3P28472 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
GABRB3P28472 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
GABRB3P28472 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
GABRB3P28472 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
GABRB3P28472 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.77□□□□□ -0.05
GABRB3P28472 CRB3P1-201ENST00000449338 276 ntBASIC14.77□□□□□ -0.05
GABRB3P28472 TERF1P3-201ENST00000505638 1227 ntBASIC14.77□□□□□ -0.05
GABRB3P28472 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.77□□□□□ -0.05
GABRB3P28472 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.77□□□□□ -0.05
GABRB3P28472 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.77□□□□□ -0.05
GABRB3P28472 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.77□□□□□ -0.05
GABRB3P28472 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.77□□□□□ -0.05
GABRB3P28472 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.77□□□□□ -0.05
GABRB3P28472 AC010319.3-201ENST00000597028 470 ntBASIC14.77□□□□□ -0.05
GABRB3P28472 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.77□□□□□ -0.05
GABRB3P28472 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
GABRB3P28472 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.77□□□□□ -0.05
GABRB3P28472 ENPP7P14-201ENST00000621765 1040 ntBASIC14.77□□□□□ -0.05
GABRB3P28472 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.77□□□□□ -0.05
GABRB3P28472 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
GABRB3P28472 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
GABRB3P28472 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
GABRB3P28472 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
GABRB3P28472 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
GABRB3P28472 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.77□□□□□ -0.05
GABRB3P28472 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
GABRB3P28472 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
GABRB3P28472 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
GABRB3P28472 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
GABRB3P28472 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
GABRB3P28472 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.77□□□□□ -0.05
GABRB3P28472 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
GABRB3P28472 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.77□□□□□ -0.05
GABRB3P28472 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
GABRB3P28472 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
GABRB3P28472 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GABRB3P28472 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
GABRB3P28472 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GABRB3P28472 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GABRB3P28472 AC020910.6-201ENST00000623084 1459 ntBASIC14.76□□□□□ -0.05
GABRB3P28472 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.76□□□□□ -0.05
GABRB3P28472 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
GABRB3P28472 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GABRB3P28472 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
GABRB3P28472 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GABRB3P28472 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GABRB3P28472 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
GABRB3P28472 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.76□□□□□ -0.05
GABRB3P28472 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GABRB3P28472 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GABRB3P28472 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
GABRB3P28472 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
GABRB3P28472 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GABRB3P28472 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GABRB3P28472 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GABRB3P28472 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
GABRB3P28472 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GABRB3P28472 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
GABRB3P28472 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.76□□□□□ -0.05
GABRB3P28472 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.76□□□□□ -0.05
GABRB3P28472 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.76□□□□□ -0.05
GABRB3P28472 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.76□□□□□ -0.05
GABRB3P28472 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.76□□□□□ -0.05
GABRB3P28472 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.76□□□□□ -0.05
GABRB3P28472 AC106760.1-201ENST00000508690 800 ntBASIC14.76□□□□□ -0.05
GABRB3P28472 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
GABRB3P28472 GNRHR2-203ENST00000581100 1187 ntBASIC14.76□□□□□ -0.05
GABRB3P28472 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
GABRB3P28472 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.76□□□□□ -0.05
GABRB3P28472 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
GABRB3P28472 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.76□□□□□ -0.05
GABRB3P28472 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
GABRB3P28472 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
GABRB3P28472 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
GABRB3P28472 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GABRB3P28472 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
GABRB3P28472 AC011474.4-201ENST00000623523 2076 ntBASIC14.76□□□□□ -0.05
GABRB3P28472 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms