Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC20.04■□□□□ 0.8
ATF3P18847 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC20.04■□□□□ 0.8
ATF3P18847 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATF3P18847 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATF3P18847 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
ATF3P18847 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATF3P18847 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATF3P18847 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATF3P18847 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATF3P18847 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC20.04■□□□□ 0.8
ATF3P18847 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
ATF3P18847 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC20.04■□□□□ 0.8
ATF3P18847 BRD7P5-201ENST00000299197 1822 ntBASIC20.04■□□□□ 0.8
ATF3P18847 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATF3P18847 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATF3P18847 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATF3P18847 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATF3P18847 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
ATF3P18847 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC20.03■□□□□ 0.8
ATF3P18847 CES3-203ENST00000543856 3178 ntTSL 2 BASIC20.03■□□□□ 0.8
ATF3P18847 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATF3P18847 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATF3P18847 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC20.03■□□□□ 0.8
ATF3P18847 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC20.03■□□□□ 0.8
ATF3P18847 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC20.03■□□□□ 0.8
ATF3P18847 PRAL-201ENST00000624952 3286 ntBASIC20.03■□□□□ 0.8
ATF3P18847 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ATF3P18847 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC20.03■□□□□ 0.8
ATF3P18847 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATF3P18847 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ATF3P18847 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC20.03■□□□□ 0.8
ATF3P18847 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ATF3P18847 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
ATF3P18847 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ATF3P18847 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ATF3P18847 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
ATF3P18847 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATF3P18847 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC20.03■□□□□ 0.8
ATF3P18847 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATF3P18847 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC20.03■□□□□ 0.8
ATF3P18847 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
ATF3P18847 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATF3P18847 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ATF3P18847 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ATF3P18847 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ATF3P18847 RN7SL767P-201ENST00000493013 295 ntBASIC20.03■□□□□ 0.8
ATF3P18847 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC20.03■□□□□ 0.8
ATF3P18847 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC20.03■□□□□ 0.8
ATF3P18847 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC20.03■□□□□ 0.8
ATF3P18847 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ATF3P18847 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC20.03■□□□□ 0.8
ATF3P18847 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC20.03■□□□□ 0.8
ATF3P18847 AC013553.1-201ENST00000560906 267 ntBASIC20.03■□□□□ 0.8
ATF3P18847 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC20.03■□□□□ 0.8
ATF3P18847 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC20.03■□□□□ 0.8
ATF3P18847 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ATF3P18847 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC20.03■□□□□ 0.8
ATF3P18847 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
ATF3P18847 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ATF3P18847 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ATF3P18847 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATF3P18847 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
ATF3P18847 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
ATF3P18847 AGGF1P1-201ENST00000509500 2073 ntBASIC20.03■□□□□ 0.8
ATF3P18847 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ATF3P18847 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC20.02■□□□□ 0.8
ATF3P18847 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATF3P18847 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATF3P18847 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
ATF3P18847 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
ATF3P18847 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATF3P18847 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATF3P18847 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC20.02■□□□□ 0.8
ATF3P18847 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC20.02■□□□□ 0.8
ATF3P18847 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATF3P18847 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC20.02■□□□□ 0.8
ATF3P18847 GAS5-209ENST00000430245 723 ntTSL 3 BASIC20.02■□□□□ 0.8
ATF3P18847 RPL3P5-201ENST00000441645 1232 ntBASIC20.02■□□□□ 0.8
ATF3P18847 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC20.02■□□□□ 0.8
ATF3P18847 AL451000.1-201ENST00000451300 1186 ntBASIC20.02■□□□□ 0.8
ATF3P18847 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ATF3P18847 CASP3-205ENST00000517513 964 ntTSL 5 BASIC20.02■□□□□ 0.8
ATF3P18847 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC20.02■□□□□ 0.8
ATF3P18847 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
ATF3P18847 EMC4-208ENST00000559078 599 ntTSL 3 BASIC20.02■□□□□ 0.8
ATF3P18847 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC20.02■□□□□ 0.8
ATF3P18847 AL133467.4-201ENST00000602953 725 ntBASIC20.02■□□□□ 0.8
ATF3P18847 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ATF3P18847 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATF3P18847 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATF3P18847 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATF3P18847 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
ATF3P18847 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
ATF3P18847 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
ATF3P18847 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.79
ATF3P18847 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ATF3P18847 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
ATF3P18847 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
ATF3P18847 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
ATF3P18847 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms